G25246


Basic Information

Item Value
gene id G25246
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 2448427 ~ 2449619 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU33920
gagcagaaagaacaagtattttgttggtttgtttctcttcttccaggtgtgacttaagtacccgttgagctgcatcacagctgcactatgtgcatggacctgtgccagtcagcacatcactcacctgtgtgcagaggacaggcagcagtagcacaaaccaagaagggtgcacaaccaggcctgggagagaaaattactgatgtccacaaaaccaaatcagagaaggtaaggtaagatagtaatgatgttaaagcaagctatgtacaccta
>TU33921
gagcagaaagaacaagtattttgttggtttgtttctcttcttccaggtgtgacttaagtacccgttgagctgcatcacagctgcactatgtgcatggacctgtgccagtcagcacatcactcacctgtgtgcagaggacaggcagcagtagcacaaaccaagaagggtgcacaaccaggcctgggagagaaaattactgatgtccacaaaaccaaatcagagaaggagcatactatacaaagacaacagtggagagttcctggatcggtctgtcctcaaagtgccagagatctacaaggacttcacccttttctgcaccatcagcgtataatcaaagtgataaaagagaacaaattattgttttctctgttgacatgaataggtgcctgtaatgtctgtccatatattcaatcaattcaataaatgttgataagtatcactgctatttcttaaatcattgtagtttttcagagcaataagatacagattattaaaaccatgttcacatttgcaacaaattaaaaccctgatcaaggcaaattgttttttcatgttccataacatttataaaaaaaaaacagtacaattaaatttaccagagctgacacttggtaaatagctttaatttaccttgtcaaaacaatgagtaattcataacaaattgcacaatatttgacacaaaaccttaaaagtgtatggttcatactacggtgaagcagtacaatgtgcctataggatttactgtagcaggaacattgatattggcaaacagatgacccaggttcaggtgagtttgtgagcagggttatgaataaagataagataggcctagtgttcacaagagggatgattcaggtatggcaacacaaattaagaataattcaattaaataggaggtatgtacaactagtagaagataaattaactatacaagagcaattaaggtaaagttttgaggtggcaagctaaagtatagtcaatagcatggagtcaagtcaacagtgtacaccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33920 False 270 lncRNA 0.46 2 2449254 2449619
TU33921 True 1012 lncRNA 0.37 3 2448427 2449619

Neighbor

gene id symbol gene type direction distance location
itfg1 itfg1 coding downstream 409425 1872831 ~ 2039002 (-)
LOC120556324 neto2 coding downstream 577151 1848854 ~ 1871276 (-)
dnaja2a dnaja2 coding downstream 601505 1835088 ~ 1846922 (-)
trnat-agu_3 NA coding downstream 615033 1833321 ~ 1833394 (-)
lrp3 lrp3 coding downstream 616481 1818431 ~ 1831946 (-)
cdh8 cdh8 coding upstream 392824 2842443 ~ 2961584 (-)
LOC120555903 NA coding upstream 713276 3162895 ~ 3163677 (-)
phospho2 phospho2,LOC100704477,LOC102197635,LOC101485115,LOC102782954 coding upstream 770151 3219770 ~ 3223756 (-)
slc7a6os slc7a6os,LOC102781591 coding upstream 859761 3309380 ~ 3317933 (-)
LOC120555482 NA coding upstream 870805 3320424 ~ 3347207 (-)
G25113 NA non-coding downstream 785941 1661728 ~ 1662486 (-)
G25112 NA non-coding downstream 786730 1661359 ~ 1661697 (-)
G25111 NA non-coding downstream 787074 1660832 ~ 1661353 (-)
G25110 NA non-coding downstream 787692 1660494 ~ 1660735 (-)
G25039 NA non-coding downstream 989885 1458037 ~ 1458542 (-)
G25256 NA non-coding upstream 199609 2649228 ~ 2649449 (-)
G25275 NA non-coding upstream 379918 2829537 ~ 2829747 (-)
G25276 NA non-coding upstream 445096 2894715 ~ 2895109 (-)
G25277 NA non-coding upstream 467293 2916912 ~ 2917542 (-)
G25280 NA non-coding upstream 520149 2969768 ~ 2970107 (-)
G25228 NA other downstream 171336 2275475 ~ 2277091 (-)
cep89 NA other downstream 707588 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 806079 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 892781 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 991319 1410674 ~ 1457108 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 3230423 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 3706603 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 3873658 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 4059640 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 4084423 6534042 ~ 6590639 (-)

Expression


Co-expression Network