G25388


Basic Information

Item Value
gene id G25388
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 3508116 ~ 3522611 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU34093
ACATGTCCAGCATGGCTTTGTTAACACACTCAACTAGAGgtgaacacacaacaacacaaatgtaTAAAATCTTACGTTttctacagaaaaaaaaaccccactaaCAAccaatcaacaaaaaaaagagaattggaatgttaacaaaaaaaatatcctATCAAGTTTggagagacaaaaaatgcacaaaatacaATCAAAATAAGACAATTATCAAAGATAAACAATAACCTCATCTGTTTTTTATTgactgctgcttttttttttcctttttgttcttATCCCAGTCAAGGACGAtggttaagtttttttttcttctgaaagtCACTGAACCATTACTCAGGTAGTAATGAAGAGAGGCTGAGTGTGAGATGCCAAGTTCCACTACTGACGGTCAGTGTGAGAAATAACTGAATCCATCCGactctactctctactgtagCTGCGGTTAGTGGATGAAAGCAGTTTTCTTGAGCGGGGCTGCTCAAGACTTCCAATGCCTGTCTGAAGCACCGTGAGAGCTGATCCGATGCACTCGTCCCGACTCAGATGCTGAAAGCCATTTGTCAGCCACCTTTTCTGTCTCGTCCCCCGCGGGGTGTGTAGTCGAGTTAGCCGAGTGGTGCTAAAATGAGTGGTTTCAGAGTGGAtggtgggggggcggggggtggGGGTCAATGCAAGGTGAGATGCACTCTGGGAAAAGAGAGAAGCATCTGGACAACCCACGATCCTTTTGGGTTCCAGCCATCATAAGCCACAAGGTTGACCCAAGTGGAAGTGAAACAGAACACAGTCGTACTGCATGTCACGTTggacagatctttttttttatttatttttttcctcctttgtcCTGTTCAGTCCGTTATTTATTGATCCGGTTTTCCCCTGCCGAGCTAGACTTTGCACAGGGCTGATGCAATGACTTTTTGAAGCTTGCCGTTATTAAGAAGTGCAGGTATACGCGGTGACCTCAGGAagctgaaaacacaacacaagtgCACAGAGTGGAGAGCGCAGACACGGCTAGAAGCGTACGTGCCTTCTGAGTGATTGTGGAGATTTTTTTCACCGAGATGTTCATTAtaataaaagacacaaaaaaaaaaagcaaggtaTAAAGCCAAAACAGCGGGGCTGAATAAGGAACGATTAACATGCAGTGTTTACAGAAACCCATCCTGAGAGAGATGAAAGCTCAGAcaagctcagcgatgccctaaCCTTACCTCAACTTTGCATATCGAGGCAATGCACTCCAAAACGAACGGGGCAATATGAACATAAAATAACTTAGGTACAGTGTTTGGAAGCGAATCCTTCCACATTATTAGATGTTGCTGAACAAGGAGGTGGATCTAAAACCAGGCTCTGCTGTGTGAGGCTGGACCTTGGCCTGGACTAGTTTCCtaaggaggggggaggaggaaggtgaGGTTGGGGAAGACAataacgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtattagggaGAGGGGAAAATAGGCGCAGGAGAAAGAGAGTGTGTttctgagagagggagagagagtgagagagaaggcCATTGTTGTTATTATGATCCCCTCGGGCTTAGTGGGCAGGGCtgggctggtgtgtgtgtgtgtgtgtgggggggggtgataGAGAGAGTGTGGGAGATTTACAGTCAGGAAACCGGCCTTCGCTTATGGAGAGTAGAGCTGATTAACTAAACACctcgacacaaacacacacacacacacacacacacacacacacatcaatcagCGTGGACAGCTTTCTTTCCCAGCgttttcaatatttttctctTGTGCTTGCTGTCCTAAGACAAGGATTCCCTGTCAGTGTCACCCTACAGAGAATCTCTCGAGCTGCCGGATCGCAGAAACTGTGATTTCAAATTAAGAAAACTCAGGTACGCTACATTTTGTTTCAACTTTTGAGTGGTTACTTCAGCTTTTGAAGTGGGTAACTCCCAGTGGGATTGCTGTGTGGAAGTCACAGTGGAGAAAAGGAGGGGCTGATAAACGAGAACTCCGTACACACAATGCTGTGTCGAGTACAATGAGTCGACATTTTCTAAGCCTGTCCAGACACTAGGCTGTCTAAGCACGGATGTGCCTGGAGGACCAATGGAAGAacaggacaggagaggagagaacagaGGAGGGGTGAAGGGGaggggggggggttttt
>TU34094
ACATGTCCAGCATGGCTTTGTTAACACACTCAACTAGAGgtgaacacacaacaacacaaatgtaTAAAATCTTACGTTttctacagaaaaaaaaaccccactaaCAAccaatcaacaaaaaaaagagaattggaatgttaacaaaaaaaatatcctATCAAGTTTggagagacaaaaaatgcacaaaatacaATCAAAATAAGACAATTATCAAAGATAAACAATAACCTCATCTGTTTTTTATTgactgctgcttttttttttcctttttgttcttATCCCAGTCAAGGACGAtggttaagtttttttttcttctgaaagtCACTGAACCATTACTCAGGTAGTAATGAAGAGAGGCTGAGTGTGAGATGCCAAGTTCCACTACTGACGGTCAGTGTGAGAAATAACTGAATCCATCCGactctactctctactgtagCTGCGGTTAGTGGATGAAAGCAGTTTTCTTGAGCGGGGCTGCTCAAGACTTCCAATGCCTGTCTGAAGCACCGTGAGAGCTGATCCGATGCACTCGTCCCGACTCAGATGCTGAAAGCCATTTGTCAGCCACCTTTTCTGTCTCGTCCCCCGCGGGGTGTGTAGTCGAGTTAGCCGAGTGGTGCTAAAATGAGTGGTTTCAGAGTGGAtggtgggggggcggggggtggGGGTCAATGCAAGGTGAGATGCACTCTGGGAAAAGAGAGAAGCATCTGGACAACCCACGATCCTTTTGGGTTCCAGCCATCATAAGCCACAAGGTTGACCCAAGTGGAAGTGAAACAGAACACAGTCGTACTGCATGTCACGTTggacagatctttttttttatttatttttttcctcctttgtcCTGTTCAGTCCGTTATTTATTGATCCGGTTTTCCCCTGCCGAGCTAGACTTTGCACAGGGCTGATGCAATGACTTTTTGAAGCTTGCCGTTATTAAGAAGTGCAGGTATACGCGGTGACCTCAGGAagctgaaaacacaacacaagtgCACAGAGTGGAGAGCGCAGACACGGCTAGAAGCGTACGTGCCTTCTGAGTGATTGTGGAGATTTTTTTCACCGAGATGTTCATTAtaataaaagacacaaaaaaaaaaagcaaggtaTAAAGCCAAAACAGCGGGGCTGAATAAGGAACGATTAACATGCAGTGTTTACAGAAACCCATCCTGAGAGAGATGAAAGCTCAGAcaagctcagcgatgccctaaCCTTACCTCAACTTTGCATATCGAGGCAATGCACTCCAAAACGAACGGGGCAATATGAACATAAAATAACTTAGGTACAGTGTTTGGAAGCGAATCCTTCCACATTATTAGATGTTGCTGAACAAGGAGGTGGATCTAAAACCAGGCTCTGCTGTGTGAGGCTGGACCTTGGCCTGGACTAGTTTCCtaaggaggggggaggaggaaggtgaGGTTGGGGAAGACAataacgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtattagggaGAGGGGAAAATAGGCGCAGGAGAAAGAGAGTGTGTttctgagagagggagagagagtgagagagaaggcCATTGTTGTTATTATGATCCCCTCGGGCTTAGTGGGCAGGGCtgggctgtgtgtgtgtgtgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34093 True 2197 lncRNA 0.46 3 3508116 3522611
TU34094 False 1627 lncRNA 0.45 2 3508370 3522611

Neighbor

gene id symbol gene type direction distance location
LOC120555474 NA coding downstream 32224 3459107 ~ 3475892 (-)
LOC120555910 NA coding downstream 49383 3433759 ~ 3458733 (-)
LOC120555905 NA coding downstream 134424 3360553 ~ 3373692 (-)
LOC120555482 NA coding downstream 160909 3320424 ~ 3347207 (-)
slc7a6os slc7a6os,LOC102781591 coding downstream 190183 3309380 ~ 3317933 (-)
dhcr7 dhcr7 coding upstream 67669 3590280 ~ 3601433 (-)
dpy19l3 dpy19l3 coding upstream 742633 4265244 ~ 4333520 (-)
znf507 NA coding upstream 828887 4351498 ~ 4375298 (-)
znf536 znf536,LOC102211462 coding upstream 1535923 5058534 ~ 5344208 (-)
ccne1 ccne1 coding upstream 2108011 5630622 ~ 5643404 (-)
G25400 NA non-coding downstream 9580 3498171 ~ 3498536 (-)
G25394 NA non-coding downstream 39034 3468664 ~ 3469082 (-)
G25392 NA non-coding downstream 42456 3465343 ~ 3465660 (-)
G25391 NA non-coding downstream 44593 3463233 ~ 3463523 (-)
LOC120555480 NA non-coding downstream 204261 3302972 ~ 3303855 (-)
G25423 NA non-coding upstream 66369 3588980 ~ 3589270 (-)
G25425 NA non-coding upstream 66730 3589341 ~ 3590131 (-)
G25428 NA non-coding upstream 162113 3684724 ~ 3724120 (-)
G25433 NA non-coding upstream 278915 3801526 ~ 3801827 (-)
G25464 NA non-coding upstream 724979 4247590 ~ 4261470 (-)
G25228 NA other downstream 1231025 2275475 ~ 2277091 (-)
cep89 NA other downstream 1767277 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 1865768 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 1952470 1510165 ~ 1555646 (-)
LOC120555898 mctp2 other downstream 2051008 1410674 ~ 1457108 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 2157431 5680042 ~ 5717433 (-)
LOC120555534 LOC103369663 other upstream 2633611 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 2800666 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 2986648 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 3011431 6534042 ~ 6590639 (-)

Expression


Co-expression Network