G25644


Basic Information

Item Value
gene id G25644
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 5800797 ~ 5807098 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU34401
tgttgtttatttgtaaaatacatttaatcCCTTTATATTTGGGCAAACCAAAAAGTCTAGAAGAGCAGAGAGGGGGGTCGAGATGGAAGTGGCAGTGGGTCCTGAGTGTCGCTTCCCAAATGAAAGAGGCATCAACATGGACAGCTAGTTCTCTCACCATCTGGGGAACACTGGACTGCTGATTGACTCCTCAGTCTCCACTGCCACAACCCCCTTCTGTCCAGACTCCATTGACGACGTACCAAACACAGATATCACAAtacaaggagagaaaaaaaaggcatacATTGTCTATCTACATCCTTCATGATTTTCGTTAGTACGTCAGAGCTGTAAATATTACAAGAcacttttactgtttttttctcGGTTTAAGTAGACGTTAACAGGCTAAGGTTTTTAGTTGGTTGACAAAAGCGGTGATAACATGAAAGGGGACGCAAGATGATATGACTTCATTAGAGTGTTTATGATGCGTGGAACGGTTGTGTGTTAGTATCAGCGGCAGCAGGGTCTAGTAACAACAGactttaaaagaaatatttccCAAGCCTCCGTGCTCAGCTGCCAGGTGGGAGCGTTCTGATCGGCGGAACCTTGAGCAGGCAGTTTAAGACTGATTTGCGGTCAACACGGTATCTGTTAATGCGACTGCGCTGCCCTATACCAATACCAGTACAAATATTACCACATTAATCAGCCAGAGACAgtcaaaaaaacacacttaaagGACGCAGACACAAACTCACGACCACCAGTAAAAAACCTAACGCAGTCGGCAACGACAGCCCTGACGTGGATTTGTGAGACTGACAAATGTAATAATATGGGAGTCGAACACGACTTGGGTTAGGTTTtaattacaagacaccacaagtTGTGGTTTTAAGGGGAACTATGTGCTGGAACTATTTCTTCTCCAGGCGTTTGGACTTCCATGAGCctctgctggttgcctggcatCGCCAAGGACTTACCGAATGGATTCGATTCCGACTCACAAGGTCCCGGTTTCGATTACATTTCTGATTCAATTTAATGTCAATAACGGTTAGGGAAATTccagttacaataccaatttagcttggatataaaagagattatCAGATGCTGaaaattgtacaagcaagaagcaaccctcaaataattttttttataacgcACCGGATTGTTACGTTAAGAATTGTCCCCCAAAAACGTTGGTGGTGggttatacatccatggtgaaaaGGCATATATTAAAAGATTGATTTCGGCATTTTAATAGTCAatatcagatcactcaaactaagtttttttttaaattggaatATCGATTATTTGAACCCAGCCCTAAACGAGACTCCACATCTCTTCACTCTTCTTTAACCATTGCTAGTTTTTTCagggaattattttttttcggCAGGAATGGGCCTCCGTACATCATGATTTGACTGCACTGGTGTTCATGATATTGTGTCCGCCCCTGTTCTGTATGTGCACACAAATACACGAGCTCAAACGGTTTTTGGTGGTGCATACAGGGCCAAACCAACAGCATAGTAACGTAAGCAGGAGGGCAAACAGCTGGCTGACTCAGCCCTGCATCAGGGACAGTTACTACAGCAACGGTGTCAACCAGAAGAGGTTAGTGGGCTGTGAAGCCagaggaggggggGCAGCTCAAAC
>TU34402
tgttgtttatttgtaaaatacatttaatcCCTTTATATTTGGGCAAACCAAAAAGTCTAGAAGAGCAGAGAGGGGGGTCGAGATGGAAGTGGCAGTGGGTCCTGAGTGTCGCTTCCCAAATGAAAGAGGCATCAACATGGACAGCTAGTTCTCTCACCATCTGGGGAACACTGGACTGCTGATTGACTCCTCAGTCTCCACTGCCACAACCCCCTTCTGTCCAGACTCCATTGACGACGTACCAAACACAGATATCACAAtacaaggagagaaaaaaaaggcatacATTGTCTATCTACATCCTTCATGATTTTCGTTAGTACGTCAGAGCTGTAAATATTACAAGAcacttttactgtttttttctcGGTTTAAGTAGACGTTAACAGGCTAAGGTTTTTAGTTGGTTGACAAAAGCGGTGATAACATGAAAGGGGACGCAAGATGATATGACTTCATTAGAGTGTTTATGATGCGTGGAACGGTTGTGTGTTAGTATCAGCGGCAGCAGGGTCTAGTAACAACAGactttaaaagaaatatttccCAAGCCTCCGTGCTCAGCTGCCAGGTGGGAGCGTTCTGATCGGCGGAACCTTGAGCAGGCAGTTTAAGACTGATTTGCGGTCAACACGGTATCTGTTAATGCGACTGCGCTGCCCTATACCAATACCAGTACAAATATTACCACATTAATCAGCCAGAGACAgtcaaaaaaacacacttaaagGACGCAGACACAAACTCACGACCACCAGTAAAAAACCTAACGCAGTCGGCAACGACAGCCCTGACGTGGATTTGTGAGACTGACAAATGTAATAATATGGGAGTCGAACACGACTTGGGTTAGGTTTtaattacaagacaccacaagtTGTGGTTTTAAGGGGAACTATGTGCTGGAACTATTTCTTCTCCAGGCGTTTGGACTTCCATGAGCctctgctggttgcctggcatCGCCAAGGACTTACCGAATGGATTCGATTCCGACTCACAAGGTCCCGGTTTCGATTACATTTCTGATTCAATTTAATGTCAATAACGGTTAGGGAAATTccagttacaataccaatttagcttggatataaaagagattatCAGATGCTGaaaattgtacaagcaagaagcaaccctcaaataattttttttataacgcACCGGATTGTTACGTTAAGAATTGTCCCCCAAAAACGTTGGTGGTGggttatacatccatggtgaaaaGGCATATATTAAAAGATTGATTTCGGCATTTTAATAGTCAatatcagatcactcaaactaagtttttttttaaattggaatATCGATTATTTGAACCCAGCCCTAAACGAGACTCCACATCTCTTCACTCTTCTTTAACCATTGCTAGTTTTTTCagggaattattttttttcggCAGGAATGGGCCTCCGTACATCATGATTTGACTGCACTGGTGTTCATGATATTGTGTCCGCCCCTGTTCTGTATGTGCACACAAATACACGAGCTCAAACGGTTTTTGGTGGTGCATACAGGGCCAAACCAACAGCATAGTAACGTAAGCAGGAGGGCAAACAGCTGGCTGACTCAGCCCTGCATCAGGGACAGTTACTACAGCAACGGTGTCAACCAGAAGAGGTTAGTGGGCTGTGAAGCCagaggaggggggtgggggtgggggagtACATTAATGACACAATCAGGCCAGATAAGGCAGGGCTAGACTCAACCAGACAAGGCAACGCCAGATTGATTCAGAACGCCAAAGCAAGGCTCTTCCTGCTGCTACAACGGCCACAGGCTGGACTCGCACCATGGGTTTCCTCTACGAGCCTGCAGAGCTGAGCGACCGGGGCCCAGCTGGCTGAAGTTAACAGTTGACGGTTAACAAGCACACCATCAATACTATGGATGCAACAGGAGTGTCAGTCACACCGACATCAGCCAACTTGCTCTAGGTGTAAGCTCTATGGGTCATATTTCAATTTGATCCCTCCGATTTGGGAGAGATGGTCATAGCGTTAAGCAAGTCGCCTCCACAAATAAGTGCACAGTTGTATAAAACCGTTAAAAGTTTTTCTCTTTTAGATCTATCttaatgttttgttattttttaacttgCATACAGAGTACACCAAAATGGGTTTCTGGAAATATTTCGTATATAACGTGctgaaataattaataatgattTCTCAGCCCAGCAAAAAGCCTGGTAACGTGTCTGCTCCTGCTTCTCCTGTTGTGGTCTGGAGAAAATCACATCATACAAAAAGATTTTGCTCAATATTCAGAATGAATAGTGCTGCCTTTTTTGCGTTTTAACCACCCAATTGAACATTTTTTGACAAAATACGAGATGTAGGTGGTGGAACTATGCCAAAATAGCCTAGagacatttgtgtgtttttagatGAATATAAAGTATGGTTTATAAGACCATTACTTATTTCTAGGGCTGcagctgttgattattttctcaattagttgtttggtctttaaaatggtgaaaaatgttgtttcctgaagcccaagatgacgtcctcaaatctCTCgctttgtccacaactcagagatgttcagtttactgtcacagaggagagaagaaaactagaacatattcacttTTAAGACGCTGCGATCAGAGAACTGTGACTTTCTTTTTTCATGAAAGAATGACTCAAAACGATGAATTATCAAAAGAGTTGGGGATTAATTTGACAGTTGAccactaatcgattaatcgtcgCGGCTGTCCTTAATTCAAcgttatgcaacttcatttttgtCCAAGGAAATCTTAAAGAACACTACTGAGGGGAAACACCTTCCTCATAGGTTTTATACAACTGAGCGCTCAAGACAGCGTTGGAGACACGATGAACGACAAACAGCCAaagacaaaccaacaaaataacTCCATGGGGGCCAACGTGACGGACATCTGGTCACTTTGACTTTGGTTCCAGCTTCCGAGATTAACTGAGATTCCTTTTGTTCGACAgacatcccacagcagtgtgggTGAAAACCCGAGACAATGGTCTGTGGGGCAGGGGACGCCATCATCTGGTTCAGTCTAGAGCAAAGACAAACAAGCAGAGAGTGCAGGAAGAATACAGGAGAAAGACCTACTGTAATACAATTTTCATGCTTAGGCAGTCATAAAGCactgttaatatatatatttatatacagtttatacatcaaacagtgaaaaataaaaataaaaatacatgttCATAGGCAAAGGGAGCAGTAAAACAACTAATGCGTCACTAAAGGATTAGAGCACCAACTGGTGAATGGCATTCATGTGTGACCGTGTGATATAATATCTACATATCAGGTTAGGATAGCACTGGTCAAATATGCATAACAGCATCTGTGACTAACGAAACAAAAGAATTGACAgttgtaatataaaaaaaaaaaaaaagaaatgctcaaTGGAGGATGGTTTTTACGTTGGTCTTCTCAAAGAGCTGACTAAATCCAGCAAGCAATATATGTGACGTGTTCCTgcttataaaagaaaaagaaaagaaaaaaagaaagagacggagacggagacgTCGTCCTTCCTTCATTTGGCGAGCGTCGCTTTAGTACACCGGGCTGTTGCGGATCCCGCAGCACAACACCATGCTGAAGATCATCTCGAACATAATAACTGCAACCACCAGAGCGGCGATACCAATCAGGTAGATCTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34401 False 1671 lncRNA 0.43 2 5800797 5807098
TU34402 True 3706 lncRNA 0.42 2 5802645 5807098

Neighbor

gene id symbol gene type direction distance location
si:ch211-260e23.9 LOC104921431 coding downstream 137543 5653454 ~ 5663254 (-)
ccne1 ccne1 coding downstream 157393 5630622 ~ 5643404 (-)
znf536 znf536,LOC102211462 coding downstream 456589 5058534 ~ 5344208 (-)
znf507 NA coding downstream 1425499 4351498 ~ 4375298 (-)
dpy19l3 dpy19l3 coding downstream 1467277 4265244 ~ 4333520 (-)
LOC120555531 LOC106909328 coding upstream 231327 6038425 ~ 6050689 (-)
LOC120555530 NA coding upstream 253520 6060618 ~ 6067226 (-)
LOC120555529 NA coding upstream 263502 6070600 ~ 6079167 (-)
LOC120555532 NA coding upstream 307113 6114211 ~ 6126128 (-)
LOC120555533 mnep,LOC103369663 coding upstream 338331 6145429 ~ 6153413 (-)
G25637 NA non-coding downstream 44372 5755510 ~ 5756425 (-)
G25612 NA non-coding downstream 124500 5674360 ~ 5676297 (-)
G25603 NA non-coding downstream 141765 5625733 ~ 5659032 (-)
G25592 NA non-coding downstream 175138 5625456 ~ 5625659 (-)
LOC120556161 NA non-coding downstream 176918 5574792 ~ 5623879 (-)
G25646 NA non-coding upstream 7381 5814479 ~ 5814684 (-)
G25667 NA non-coding upstream 69155 5876253 ~ 5878018 (-)
G25672 NA non-coding upstream 77746 5884844 ~ 5885161 (-)
G25674 NA non-coding upstream 98258 5905356 ~ 5905667 (-)
LOC120555539 NA non-coding upstream 315949 6123047 ~ 6125990 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other downstream 83364 5680042 ~ 5717433 (-)
G25228 NA other downstream 3523706 2275475 ~ 2277091 (-)
cep89 NA other downstream 4059958 1664770 ~ 1740839 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other downstream 4158449 1587544 ~ 1642348 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other downstream 4245151 1510165 ~ 1555646 (-)
LOC120555534 LOC103369663 other upstream 349124 6156222 ~ 6167529 (-)
ankdd1a ankdd1a other upstream 516179 6323277 ~ 6346561 (-)
pop4 pop4,LOC105418436,LOC104960843 other upstream 702161 6509259 ~ 6524355 (-)
tpcn2 tpcn2 other upstream 726944 6534042 ~ 6590639 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other upstream 835066 6642164 ~ 6693331 (-)

Expression


Co-expression Network