G25824


Basic Information

Item Value
gene id G25824
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6529518 ~ 6532184 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU34657
ATACAAGCTGAAAAAATTGCATTCCAACTTCCCTATACATCCAAACCTTTCAATAAAAATCATTCCCCTGTTTTTTTCTACAAATAAACCACATttgaactttatttatatacataCCAAGGCACACTTTGGCTTTGAATAAAATCTAGAaatcttgtttaaaaaaaaaaaaagagatgtgaATGCTTTATGGCAGATACCCCTCTTCAAAGTCAGAtcaaatctgtttgtttttacggagctattttttttatacgCCATCAGTAGAGGGATGGTAATGCAGCCTCACCAGCACCACAAATACTCCCAGAATATTAGCCCCATTCACACATGCATGTCTCTCCCTTTATGTTCTGGAAATTAGACATATTGGTGTCTCAGGTGTGAGTATAATATAtgaacagatacacaaagctCTATGTTCTGAGACATAGTATATGTTGAGTATATATGCTGTATATGGATGgttctaaaaaaaacattacacataCATTTACTTTCACCAAGGAGCTTTTGATTTTGGTTCTAATAGTTAGCAGGTTGTCTCAAAAACCTACGATAATagtaattttttattaattttaataaaaatttttatttatatagcgcctttcatgaaaccTAAGGACGCTTTACATTATTACAGTGGCTATACTAAtggaggttgtaggctgtggtaaaCAAGTGGAGTTTcaggagtcttttttttttttaaatgtccagggatgtagcatttcggatatctgcagggagggtgttTCCCggagggatggggctgcaacactaagGCTCTGTCTCCAAAAGTACAGAGTCTGGGgtggggaatggagagcaggccagcgtctgaggaccgcaggtttcgggttggggtgtatggatggaggaggtcagAGAGTAAGATAAGTGTAATTtcaaattattatttcattatttaaaattgtgtgtgtgtgtgtgtgtggtaagtaaGGCCAGTGgctcccaacctttttggtctgAGGTCCCCTCACAGCCCTATCAGATGAACTCACGTACCCCGTTATCACTTCCCAATGTATGTCCCAAATGTATAACactattcattatataaaagtggaTACTGTTCAATTTTCTTGTAAGATTGAACTTTCATTAttaaggttggtttggtcagcaatcCTAGTACTACTAGTCTACAAGGCTGCTACTACTTGGGGGGTAGTCTCGGATAGCCAGACCAGTCTGGCTAGTCcccacagcattctgggattggagaaaaacgcgctctggtttattggcatttctttaaactaatcacactcgtcttgggcggtgctaagcgccggacagagcaacagggcctctgcaaaatagcctctggaaggaacctgttttggtggaacatgttcaaaagttgttttagtcgtgcaacagaaacaggaaactcagattggacagatagtctagctaactgtctggatttaccctgcagagatctgaggagcatttaaacatagtcctcataaatccaccgggttcagaacgccaacacaaaggaagcggaagaaaaaaaaaagggtgaggctatttgcacccctggtacaattagcagtgtatgctattcgtaacctggtgcaattagaaattaatgctattcgtaccccaccggtgcacacagcaatgtgttctattaataccccgtctggtacaaatatcaatgttatttgcacccctgtgcatttacagtaccttggcatatatttacacacagttatccatactactcatgtattacacctttttggaatattatcgccctgacattgattcttaccctaaccataaccaatcccactcctcttgcctaaacctaaccaacccaaccagagcaggcatattcatgagtctttccctaccaccctgcaaaaaaagtTCGCGTTCGCGGAAGTGCATGCAAATGAtctaatccaaaatgaaaaatcaAGACCACCTCAGCAGGGAATCAAACTCCAAACTCCCAGACCAAAGCGCAGtgttctaaccactcacctagcagttcttacagcatgttgtacaactgtttaccacttggtgtcttcaagcctcggttgctaggtaaccatgctgtatacaaaaaataggtactaactaacaaactaactgttgaatgctttcactgaagacggAAAgtgcaactgtagtatccattttccgctagaaattcaattgttataaactttagagacaaaactttcctaatatgccagtttctgtggtcatggaagatgaacgtccgccatgatttcggtgcacgcgatcaatgtgtttttgttgttacatcACAGGGTGTGAagagctcagctgtgtggccgaggctattcgtaccgggggtgcaaatagacactcaaaaaaaaaaaaaaacacatccgaCGGACTTTTTGATATATCCTACTGAATGAAGGTTTTAATTGTTTGTCCATTAGTTTTAGCtaatcatttgaactgtttaatcATCTATGTCGAAGATATATTAATTACTTTTAGCAAACATTCTGTGCTGGCTTGCTAACTAGTTTTGGCCAGGCTGACTTAATGTTAATATGTggatatattctttttttaatcaaatcatattttcaatttcttttttcaaatgagTTGAGCTACTCTTCAATTTTCCACGTACCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34657 True 2667 lncRNA 0.40 1 6529518 6532184

Neighbor

gene id symbol gene type direction distance location
LOC120555501 NA coding upstream 33797 6493937 ~ 6495721 (+)
mtch2 mtch2 coding upstream 218378 6295097 ~ 6311140 (+)
trnal-uaa_1 NA coding upstream 476621 6052815 ~ 6052897 (+)
trnal-uaa NA coding upstream 477549 6051887 ~ 6051969 (+)
fadd NA coding upstream 497364 6026435 ~ 6032154 (+)
bnc1 bnc1 coding downstream 654545 7186729 ~ 7211577 (+)
sh3gl3a LOC100692766,LOC101467334,LOC103355412,LOC102293456 coding downstream 700364 7232548 ~ 7290870 (+)
LOC120555848 LOC107591295,LOC105891088 coding downstream 785725 7317909 ~ 7330702 (+)
adamtsl3 LOC101469981 coding downstream 822693 7354877 ~ 7670801 (+)
LOC120555922 NA coding downstream 1243449 7775633 ~ 7783499 (+)
G25797 NA non-coding upstream 101258 6428058 ~ 6428260 (+)
G25713 NA non-coding upstream 248731 6278701 ~ 6280787 (+)
G25710 NA non-coding upstream 491549 6036859 ~ 6037969 (+)
G25709 NA non-coding upstream 493729 6035456 ~ 6035789 (+)
G25675 NA non-coding upstream 617065 5911229 ~ 5912453 (+)
G25827 NA non-coding downstream 58011 6590195 ~ 6590618 (+)
G25850 NA non-coding downstream 109266 6641450 ~ 6641983 (+)
G25888 NA non-coding downstream 442151 6974335 ~ 6979755 (+)
G25893 NA non-coding downstream 455328 6987512 ~ 6991931 (+)
G25895 NA non-coding downstream 460811 6992995 ~ 6993204 (+)
rwdd3 rwdd3 other upstream 133812 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 239742 6262410 ~ 6289776 (+)
G25743 NA other upstream 241441 6287048 ~ 6288077 (+)
G25708 NA other upstream 494325 6034209 ~ 6035193 (+)
tshz3b tshz3 other upstream 1692233 4793815 ~ 4837285 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other downstream 461772 6993956 ~ 7005678 (+)
G26205 NA other downstream 2221517 8753701 ~ 8760301 (+)
G26236 NA other downstream 2536545 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 2801045 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 2858924 9391108 ~ 9604462 (+)

Expression


Co-expression Network