G25888


Basic Information

Item Value
gene id G25888
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6974335 ~ 6979755 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU34729
CCAAATGTTTACTAGGATGCCATCTACTCGGTCCCATGCTGCTCTTCATCTCACATACACACTTGTGCTCCTGTAGTTCAGTACACTGGACGCCACAGTCCACCAAATGTGCCTTTGATGGAGACACGTCGGCTATATTCTGGTCAGCCGTCTGGACACACAGTTGCTGGTTTTGGACTTCTTTATTCCTGTAAGCGCCATCCTCCACCTCCATGTCCATGTCCGCTCCGTTTAGGCGAATCAGCGGACACCTACTGGTGTCTGCGTCCTCTTCAGGGAGGGTAGATATAATTTGTTTACTCTGCAGGGGAGTCGGGGAAGCCAAGGGGCCCTTTACTAAAGGAGCCATGCTCTGGCCTTGCTTTAGTCTCCATATTTTAGAGCCATCCATCTCACTGCACTTCTTAGTGGGGATAGAGGGGGCAAGAGACTCCACAGACGCATTCATTTCTCTCTCCGTCTGACTGCTACACATTTGAGAGGGAATGATCTCTGTAGTGTCTGCTTGTGGATTTGTCTCGTCGCCATCTTCTTGCTCATTGTCCGGGAGCTTTTGGGAATTATTTTGCGAATGTAGCAGTTCATCTGTGTAGGGTAGGCTATGCCTTACAGCTCTCACGGATTCTGCATTTTGCTCTTCATGAGCTTTTCTCAGTTTGAAGATCTTGAAAAGGGTTGCAATGTCCATAGAGCTTAAGTTACCCTCAGCATTACCATTAGCATCATTAGTATAAGCGGCATCAGCCATCACTGGACCATTTTTGGTCTGAGTTAGACTCTGGGAAAAAGACTTCACATGCTCTTCTTCAGCTTCGTAAGACGGCAGCTGGTGGTCATTCTGAGGCAGCGTTGGAACAGAGTCAGTTACTTCAGGTTCCAGCATGCCGTTCTGCAGCAGACATTCCTTACTGGGGATAAAGGGGGGAAAAGACTCCACAgtttttatttgatagggagTCGTgtcttcatgtggatttgtctCGTCGCCATCTTCTTGCTCATCGTCAGGGATCTTTTGGGATTCCTTTTGTGAATGTAGCAGTTCATCTGTGTAAAATAGCGTACGCCTTACGCAGTCTACCAATCCCACCGGCTCATTTTCTCTTCTGGATTTTGCCTTTTGCTCTTCATCCGCTTCCCTCAGTTTGAAAAAGTCTGGGCTGTTCTTAGAGCTTAAGTTACCCTTGGCATTATGATTAGCACCGTCTTGCACCACTGGACCAGTTTTGGTCTGAGTTGGACTCTGGTAAAAAGACTTCTCATGGTCTTCAGTTTCGTAAGACGGCAGCTGGTGGTCATTCTGAGGCGGTGTTTTGGATACTTGAACACAGTCATTTACTTCAGGTTCCAACATGCCGTTCTGCAGCAGCCAGTCCTTAGAAGGGATAAAGGGGGGCAGAGACTCCACAGACCAAACAGACTCATtcatttttctctccatctgaGAACTATTTAAAGAGATTTGATAGGGAACGATCTCTGTCGCGTCTTTGTGTGGATTTGTCTCGTTCTGTACTAGCTCATTGTCAGGGAGATTTTGGGATTCGTTTTGTGAACGTAGCAGTTTATCCCTCCTTACTGAGCCAATGAATTCCACCGACTCATTTTCTCTTCTGCATTCTGCATTTTGCTCTTCATGAGCTTTTCTCAGTTTGAGGATCAGACAAAGTGTTGCACTGTCCTTAGAGCTTAAGTTACCCTTAGCATTATGATTAGCACATTCAGGCACCACTGGACCAGTTTTGGTCTGAGTTGGACTCTGGTAAAAAGACTTCTCATGGTCTTCAGTTTCGTAAGACGGCAGCTGGGGATCATTCTGAGGTGGTGTTTTGGACATTGGAACGGAGTCTGTTACTTCAGGCTCCAATATACCGTTCTGCAGCAGCCACTCCTTAGAGGGGATAAAGGGGGGCAGAGACTCCACAGACCAAACAGACTCATtcatttttctctccatctgaCAGCTATACGTTTGATTGGGAATTATCTCGGTCATGTCTGCTTGTGGATTTGTCTCGTTGCCATTGTCTTGCTCATTGTAAGGGAGCTTTTGGgattctttttgtgaatgtagcaGTTCATCTTCGTAGGGTAGGCTACGTCTTCCAGAGCCAACCAATCCCATCGGCTCACTTTCTCTTCTGCATTCAGCATTGTGTCCTTTATGAGCATCTATCAGTTTGAGGATCTGGAAAAGGGTTACACTGTCCATAGAACTTAAGTCACTCTCAGCAACATCATTAACATATTCATCGTCAGCCATTAATGGACCATTTTTGTTCGGAGTTGTACTCTGGTAAAAAGACTTTGGTTCTTCAGTTTCGTAAGACAGCAGCTGGTGGTCATTTTGAGGTAGTGTTTCGGACATTTGACCAGAGTCAGTTACTTTAGGCTCCAAAATTCCGTTTGTGAGGATAAAGGGGGGCAGAGACTTTACAGACCCATtcatttttctctccatctgaGAAAAAATTAAAGACATTTTATAGGGAATGATCTCTGTCGTGTCTTCGTGTGGATTTGTCTCGTCATGTACTAGCTCATTGTCAGGGAGCTTTTGGGATTGGTTTTGTGAACGTAGCAGTTCATCTCTCCTTACAGAGCCAATGAATTCCACCAACTCATTTTCTCTTCTGGATTCTGCATTTCGCTCTTCATGAACTTTTCTCAGTTTAAGGATTGTGAAAAGGGTTGCACTATCCTCAGAGTGCAAGTTACCCTTGGCATTATGATTAGCACCGTCAGCCACCACCGGACCATTTTTGGTCTGAGTTGGACTCTGGTAAAAAGACTTTTCATGGTCTTCAGTTTCGTAAGACGGCAGCTGGTGGTCATTCTGAGGAGGCATGTTTGACACTGGAACAGAGTCATTAACTTCAGGTTCCAACATGCCGTTCTGCAGCAGCCAGTCCTTAGAAGGGATAAAGGGGGGCAGAGACTTTACAGACCAAACAGACTCATtcatttttctctccatctgaGAACCATTTAAAGAGATTTGATAGGGAATGATCTCTGTCGTGTCTTCGTGTGGATTTGTCTCGTCATGTACTAGCTCATTGTCAGGGAACATTTGGGATTCGTTTTGAGAATGTAGCAGTTCATCTCTCCTTACAGAGCCAATGAATTCCACCGACTCATTTTCTCTTCTGGATTCTGCATTTTGCTCTTCATGAGCTTTTCTCAGTTTGAGGATCTGAAAAAGTGTTGTACTGTCCTTAGAGCTAAAATTACTCCTAGCATTGTGATTAGCGCCGTCTGGCATCACTGGACCAGTTTTGATCTGAGTTGGACTCTGGTAAAAAGACTTTTCATGGTCTTCTTGAGTTTCGTAAGACCGCAGCTGGTGGTCATTCTGAGGTGGTGTTTTGGACACTTGAACAGAGTCAGTTACTTCAGGTTCCAACATGCCGTTCTGCAGCAGCCACTCCTTAGTGGGGATGGGGGGCAGATactttatagaccaaacagACTCATTCATTTTTCTCTCCATCGGAGTACTATTTAAAGACATTTGATAGAGCTCTGTCGTGGTTGCATGTGGATTTGTCTCGTCGCCATCTTCTTGCTCATTGTCAGGGAGCTTTCGGGATTCCTTTCGTGAATGTAGCAGTTCATCCGTGTAGGGTAGACTACACCTTACAGCATTTCTGGATTCTGCATTTCGCTCTTCATGGTCATTTCTTAGTTTGAAGATTGTGCAGAGGGTTGAAATGTCCATTGAGCTTAAGCTATCCTCAACATTACCATTAGCATAAGCACAGTCAGCAACAACTGGCCCATTTGTGGTCTGAGTTGGACTCTGGTAAAAAGACCCATCATGGTCTTCAGTTGCGTAAGATGGCAGCTGGTGGTCATTCTGAGGCAGAGTTTTGGACATTGGAACAGGGTCAATTACTTCAGGCTCCAACATGCTGTTCTGTAGTAGCCACTCCTTGGTGGGGACAAAGGGGGGAAGAGACGCCACAGACCAAACAGACTCATTcatttccctctctgtctgacaGCTATTCATTTGATAGGGAATGATCTCTGTTGTGTCTTCATGTGCATTTGTCTCGTCATCTTCTTGCTCATTGTCAGGGAGCTTTCGGGATTTATTATGTGAATGTAGCAGCTTTTCTGTGTAGGGCAGGCTACGCTTTAGAGAGCCAATCAATCCCACCGGTTCATTTTCTCTTCTGCATTCTGCCTTTTGTTCTCCATGAGCTTTTTTAAGTTTGAGGATCTGAAAAAGTGTTGCACTGTTCTTAGAGCATAGGTTACGCTCAGCATTATCATTCGTACTGTCAGCCACCACTGGACCATTTTTGGTCTGAGTTGGATTCTGGTAAAAAGACTTATGTTCTTCTTCAGTTTCGTAAGCCAGCAGGTGTTTGTCATTCTGAGGAAGTGCCATTTTCAGAATCCTTGCCTGCGGCGTGCCACTTCTCCAACTCATTAGAATGTCAGGAACAGAGACGCATCTCTCTTTGACAACCTCTTGTTGAAAAGAGCTACAAACCGGAACTATACTATCTGGAGAACTCACTGACATGAGTGAATTGCTGCTGGGTAGGGTATTGTTCCTAACCTCGGCAGATGGAGAGTTTGAGCCGGTTCCACGCCCAGAATCTGAGCCGATGAGAGGGCTTCTTTCTCCGTAACGACCTCTCTGTACGGGTTCTGTTTGGACCTCACAGTTAACAGTTTCTCTAATATTGCCAGTATGAGGCAGATTAATTCTGTGGGTCCGGTTTGGGTTCTGGTAGGGTGCGCTAGGAGCGTAGACTTGGGGGTGGAGGAAACGTCTGTCGACAGGTTGGATGTGAGGGTTGGGGTGGTACAGAATGTGTGGTGGAGCATCCATATAGGGATGAGGAGGGAATGGGGGCATGACCATACCATAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34729 True 4890 lncRNA 0.46 2 6974335 6979755

Neighbor

gene id symbol gene type direction distance location
LOC120555501 NA coding upstream 478614 6493937 ~ 6495721 (+)
mtch2 mtch2 coding upstream 663195 6295097 ~ 6311140 (+)
trnal-uaa_1 NA coding upstream 921438 6052815 ~ 6052897 (+)
trnal-uaa NA coding upstream 922366 6051887 ~ 6051969 (+)
fadd NA coding upstream 942181 6026435 ~ 6032154 (+)
bnc1 bnc1 coding downstream 206974 7186729 ~ 7211577 (+)
sh3gl3a LOC100692766,LOC101467334,LOC103355412,LOC102293456 coding downstream 252793 7232548 ~ 7290870 (+)
LOC120555848 LOC107591295,LOC105891088 coding downstream 338154 7317909 ~ 7330702 (+)
adamtsl3 LOC101469981 coding downstream 375122 7354877 ~ 7670801 (+)
LOC120555922 NA coding downstream 795878 7775633 ~ 7783499 (+)
G25850 NA non-coding upstream 332352 6641450 ~ 6641983 (+)
G25827 NA non-coding upstream 383717 6590195 ~ 6590618 (+)
G25824 NA non-coding upstream 442151 6529518 ~ 6532184 (+)
G25797 NA non-coding upstream 546075 6428058 ~ 6428260 (+)
G25713 NA non-coding upstream 693548 6278701 ~ 6280787 (+)
G25893 NA non-coding downstream 7757 6987512 ~ 6991931 (+)
G25895 NA non-coding downstream 13240 6992995 ~ 6993204 (+)
G25902 NA non-coding downstream 44111 7023866 ~ 7025761 (+)
LOC120556370 NA non-coding downstream 62428 7042183 ~ 7045161 (+)
G25942 NA non-coding downstream 318744 7298499 ~ 7298701 (+)
rwdd3 rwdd3 other upstream 578629 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 684559 6262410 ~ 6289776 (+)
G25743 NA other upstream 686258 6287048 ~ 6288077 (+)
G25708 NA other upstream 939142 6034209 ~ 6035193 (+)
tshz3b tshz3 other upstream 2137050 4793815 ~ 4837285 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other downstream 14201 6993956 ~ 7005678 (+)
G26205 NA other downstream 1773946 8753701 ~ 8760301 (+)
G26236 NA other downstream 2088974 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 2353474 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 2411353 9391108 ~ 9604462 (+)

Expression


Co-expression Network