LOC120556365 (LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289)


Basic Information

Item Value
gene id LOC120556365
gene name LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 6993956 ~ 7005678 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU34734
GCTGCCGAGGTTAACCTGCCATCAGTAACTCTGGCAGCACACTTGCTAATTGCCAGTTAGCGAGCTAGCTAGTAGGGCTGTCACCTTATCTGAAAGGCGCCATGTCATTTCTCCGACctcaataacccgaaaaattcccttttgTTCCTACTACAGCCCACTAGTCTTGACGTCCACCAGCCGAGaccccgcccttcaatagcatttattggccaggcgtccatgcttacgcaaggtaacgtaaccccatttgtacaaaccactcgaggtcaaatgcctaaccccaaccaattgagatgcttcgtagggcgggtcttggcgcggccatagtgggatttgtaattaCGCCACCAGTGGGACGTCAATACTAGTGGGCTGTaagaccaaagggaatttttcgggttattgagaggttGGAAGAATAGAGCGTCTGAGAAATGGGCAGTACCCCATCTGAAAAGCAATATTTGATCTCTACTAATCTGTTTTGAATTCAAAATTCAGAAGCGCATTAACCATTCATCCTCCAGCAAGGGGTGTCATGGCCTGTCCGTAAACTAGGCTGCTGTTTTTGTCCGTTTTTATTCACGCAAAATAGAGAAAACTAGCAAGCGCTGCTGAAAGGATAGCCATGACACCAAACCATCTGAGAAGTAACGTGTGGAGGCATTTGGGATTTTTGGACTGAAAACTTCAGTCATAGCTTCATCATAGCTTGTCACTCAAGCGATGTAGTGGAGGCACCGCTGAATGAAAACTTTGATATATTCACTTGAACTTTGGCTTTTGGGAATAGTGGCAGCGCTGCTAGCTAAAGTTAAAGTTGACTCAGGAGACATTTTCAGACCATCAAACTCCTGTGGAGCACGTAGTCATCTGGTAGAGCTGGGTTATTTCAAATGGTTTGCGACACAGCTAATATGATAGCTTCCTCTATCTGGTTCTCTGTCATTTGCATTGCAAAgaactaaaaaaaatatatatatttttctgacTGGGCCAGATGTCACAACCAGCTTAATAAATAGCCACTTCTTTACAGGCTGTTAGCAACAGAGTTAATTTCccctagggttgggcatcgttttgattttaacaattctgattcagATTCTTCGTTTTTGATTCCGGTTCCTATAGAGTCCagttctttgaggggtggagttgaaacgggtcacatgcttatttcacagataagaggaaaaTGTTGTTATACATAACATAGTCCTATTCCAAAAATGACGTTAGATGACATGTTCTTGCAATTGTCGTCTGTTACACTGGCAGGGCGTTTGCTGCCACTGGTGGTCAATCCACGTCATTTTTTAACTGAACTCTGGGATATGTATTATTAAAGCTCACTTCTGTTACCACAGGTGTCACCAAATCGACCAGGATCTTAAGGAGTTAAAAGGGTTAGAACTGAAACATAGGTTGACCttctattttaacttttttctgTCCCTGCTTAAAAATgtaatgaggaggaggaggaagggggatATGGGAAATGAATGATACTGGTCGAGAACATTGGTTGTTGCTGGCTTTTTGCCCACTTGAGAACTTAAATGATGTAGAGATGAAAGCTCAGCGAATGTCCTTGTGCAACAATGTGTTGCTTGATTTTGATCTGCATCTCAgcacttttgttttttcttttgttttaaatgaccCATGTCATTTGGTTTCCATACGGCCAGCTCAACAGGGCGTACAGAAAAGAGCCATGTCAGGAGTTCTGAAATGCCACTTTATACTGGAAGAagatggtttgttttttttctgatgcgTGTGAATAAAAAGATTTTTGCAGATTTCTATCAGCGATGCATATCAATAGGAGGCATTACAGGAGCTGCAGTTATTGTAAGGAAACACTGGGATTGTTCTACTAGCAGCGTTAACGAATAGAATCCTCTCAAATCAAAGTCAATTTACACTCTCATCCTCTGCAGATGTTAttctaaggccggttacacactgcctgcgtggcgtggaGTTTGTCGCGTggcagctgcgtggatttttccacgcctttacacaccagaaacgtgtctgacaacaacgtaggcagtattgactgcaaaatgggctacagaattattttttttaattacattcatATCTGCATTCATATCAAAATCTATAGACTTtcaaacatgtcatttattaataggtatttgtgtctaaacgacaaACATcttttctattttgcctggaaacgcttcaaAACACCTAAATGTgtgtcggttctatttctagcaggcacgcgtttacGGCGCGGCTCGacgcgtgtcacgcaggcagtgtaaGCTCTAACCCGTTAACacgggagccgaaatataaactgacacgctcgcgcgaagCAGCCAGTGCGTAACCGGCCTAAGTCACCAAGTTTTCCTTTCTGTTAAATCTTTAACTTTGCTCCGACAACTACGTAGGCACGGTCTCCTAATGCAGCTACTGTCCTGCAACAGCCGGTCCAATAACTTgaatctagtaggctacttaactCTAACCTGCGATTGCTTCGTCTGCATCCTTACTCGGAATATTTTATTTCTGGATCTAACTACAAGACTGATCCAAGATCAGCACCTTTAggcaacttttattttttttcccccctctgcaGTGGAAACAGAATTGCTTGTTAACTCATCAAAGTGTTTGGTGAAGGACCAGATGCCCACAGCACTGTTAAATGTGTTGTTCCGGCCATCAGTTTGTCACGTGGCTGTCCCTTTTCCAACTctgtattttgtaaaaatcaGTGAGAATCATAGGTGGCATTACTGACCAATAATGTTATAGGGGTGTTACTGACAAATAATCTTCCTTAACAAATATGTACACAGAGCCATGTGTAACTGGGTGGAATGTCCTTAAAGACGTTGCCTTTCAGTCTTTTCTACATTTCTCCTCGTGCTTATCTTCATATTTGATGCGATGAGGTCAGGTGGTGTGCGTATTTTTCTTTCGGGTAGAGGACGGGTCTAGTTTGAGGGGGAAGACCTTTCGGCAtccatttcctctttctttggcGTTGCCCCAGATTGACTCTCAGGTAATGTCAGAATCTACCTCTGTAGGTGAGACTAACTGTGAAAGAAGAGGCATGAGTCACCATAGCTTTGGAGAGCTCTATTTTTACTATAAATGAGCCCACACACCCCCCCTTTGATTGTACAATGTTCTTATAGTCCTGTCTTGC
>XM_039795921.1
ttttaaattttttgttccagggaaggaggttgttctTTTGATGCAGGCCCTGAACTCCCTAGCCACTCCTGAGGAGAAACTAGCCGCTTTGTGCAAGAAATACGCAGACCTGTTGGAGGAGAGCCGCTGCATGCAGAAGCGTCTGAAAGCCCTGCAGAAGAAACAGTCTCAGATCGTGAAGGAGAAGATCCACCTGCAGGGGGAGCACAGCAAGGCCATCCTGGCCCGCAGCAAGCTGGAGAGCCTCTGCAGGGAGCTGCAGAGACACAACAAGACACTGAAGGAGGAGAACTCCCAGCGGTCCCGGGAGTACGAGGAGCAGCGGAAGGAGGCCATGCTGCACTTCCAGATGACCCTGAGCGACATCGAGGTGCAGATGGAGCAGCATAGCTCCCACAACACCAAGCTGAGGCAGGAGAACATGGAGCTGGCCGAGAAGCTCAAGAAGCTCATCGAGCAGTACGAGCTCCGAGAGGAGCACATAGACAAGGTGTTCAAGCAcaaggagctgcagcagcagctaatggACGCCAAGCTGCAGAGAATCACCGAGATGATGAAAGAAGTCGAGGACAAGCAGCAGAGGGAGCGAGACTTTCTGTTGAAGGACGCCACAGAGTCCAGACGCAAGTGTGAGTTGATGAAGGAGCAAGAAACGCAGCTCAAacaacagctctcCCTGTACATGGACAAGTTTGAGGAGTTTCAGAGCACGCTGGCCAAAAGCAACGAAGTCTTCACCACGTTCAGACAGGAGATGGAGAAGATGACCAAGAAGATCAAGAAGCTGGAGAAGGAGACGACACAGTGGAGGACCAAATGGGAGAGCAACAACCAGGCGCTGCTGCAGATGGCCGAGGAGAAAACTCTGCGCGACGGCCACTTCAAGGCCCTGCAGGGGAAGCTGGAGCTGCTGGAGAGGCTGTGCCGCGCCCTGCAGAAGGAGAGGAACGACCTCAACAACCAGCTGAGCCTCCTGCAGGAGCCGGGAGACAAAGGGAGCGCAGCGCTTCCCGAGGCCCAGCCGCCAGAGCCCTCTGCTggggaggacgaggaggaggaggaggaggaggaggaggaggcggcggcagaggaggaggcggaggaggaggagggcggtCTGGCACAGGCCGGCGAGCTGGAGGCGGAGGGCATCCACCGAGCGCCCCGACCCCCGAACTGGAGCCCACGGCGGCCGCTACTGACACAACCACTACCGCTGCTACGACGACGAGCAGCCAGCCCGCAGAAACGGCAGCCTCGCAGCAGGACTGAAGAAGCCCCCCCACACGGTGAGAAGGCTGTGATGGGAGGGGGCTCCACAAACCTCCAGCCCACAGAAATAAAGCATTTTCAACGGGGatagatttcttttcttttgcctCTTCGGGTTTCTACACGGAAACTCAACCCCAtatctctcttctttttttttatgtgtgtgccgTTAGTAAAAGAGGAATAACATGACTCTATTGTAAGGATTCTATTCTAAAATGTTGCCAGTGTTCACATTGGTAATAACTGGCTTCGTGGCAAGCACTTGGTCCTCCCGTTTTCTACCGCAACTGTATTTTCGTAGGCAATTTCCATGCAGTCCCATTGACGCTGTTCAGTCAAATTGGCCAGGGTGGCAACTTgcgatttttatttttcatcgaTTAATCAGCCGATCACTTTCTGGATGAACGGGGTTAGTAGTTTGGATTCTAAAAGGTGAGAAATGTGGATGAGCGTTCCCCCAAAaagtccaagatgacgtcctcaagtGTCTCGTTCTGTCCACAGCTCAAAGATATTCCgttcactgtcacagaggagagaagagaactagaacatattcacattaaaCAAGCTGCAGTCAGAGAATTAGCCCCTTTTTTCCCATTTAAAAAGTGACTCCAACTGATTAATCGATTTATCAAAATAACCCGCCGATTGATTTAAATAGTTGACAActtatcgattcatctttgcagatCTATAATTGGCCTTCCGTTTCTCCCTTCACATGGCCTCTCCCTGTAGCATCCCACGTCTCGCTGGCTATTCAAGTTGGATTCAATTCCAACATGGGCATATCGCATGCATAATTTGTCATAGGTCGCTTTTGATTAATGTAGCCCTTAATGTCCCCATGTGATCTGAAAGAGCAAATGGGACATAGTGTAGAACAAGTTTCAAAGTCTGTTCTTGGCCACAGGGTATTAAGCAAGTTTTTCTGATCATGTCATATCaggtttttaaattttaaaattttCAGGATAAGAGCAGGAAGTGTCAGCAAAATTAATCTGCACATGGGTGCGTGTAATATAATAATGTGGTGGTGGTTATTTTTTTCCGGCTCGGCGACGTGGTGACTACAGCTGGCGAGCTACTGTAGCTGCCGAGGTTAACCTGCCATCAGTAACTCTGGCAGCACACTTGCTAATTGCCAGTTAGCGAGCTAGCTAGTAGGGCTGTCACCTTATCTGAAAGGCGCCATGTCATTTCTCCGACctcaataacccgaaaaattcccttttgTTCCTACTACAGCCCACTAGTCTTGACGTCCACCAGCCGAGaccccgcccttcaatagcatttattggccaggcgtccatgcttacgcaaggtaacgtaaccccatttgtacaaaccactcgaggtcaaatgcctaaccccaaccaattgagatgcttcgtagggcgggtcttggcgcggccatagtgggatttgtaattaCGCCACCAGTGGGACGTCAATACTAGTGGGCTGTaagaccaaagggaatttttcgggttattgagaggttGGAAGAATAGAGCGTCTGAGAAATGGGCAGTACCCCATCTGAAAAGCAATATTTGATCTCTACTAATCTGTTTTGAATTCAAAATTCAGAAGCGCATTAACCATTCATCCTCCAGCAAGGGGTGTCATGGCCTGTCCGTAAACTAGGCTGCTGTTTTTGTCCGTTTTTATTCACGCAAAATAGAGAAAACTAGCAAGCGCTGCTGAAAGGATAGCCATGACACCAAACCATCTGAGAAGTAACGTGTGGAGGCATTTGGGATTTTTGGACTGAAAACTTCAGTCATAGCTTCATCATAGCTTGTCACTCAAGCGATGTAGTGGAGGCACCGCTGAATGAAAACTTTGATATATTCACTTGAACTTTGGCTTTTGGGAATAGTGGCAGCGCTGCTAGCTAAAGTTAAAGTTGACTCAGGAGACATTTTCAGACCATCAAACTCCTGTGGAGCACGTAGTCATCTGGTAGAGCTGGGTTATTTCAAATGGTTTGCGACACAGCTAATATGATAGCTTCCTCTATCTGGTTCTCTGTCATTTGCATTGCAAAgaactaaaaaaaatatatatatttttctgacTGGGCCAGATGTCACAACCAGCTTAATAAATAGCCACTTCTTTACAGGCTGTTAGCAACAGAGTTAATTTCccctagggttgggcatcgttttgattttaacaattctgattcagATTCTTCGTTTTTGATTCCGGTTCCTATAGAGTCCagttctttgaggggtggagttgaaacgggtcacatgcttatttcacagataagaggaaaaTGTTGTTATACATAACATAGTCCTATTCCAAAAATGACGTTAGATGACATGTTCTTGCAATTGTCGTCTGTTACACTGGCAGGGCGTTTGCTGCCACTGGTGGTCAATCCACGTCATTTTTTAACTGAACTCTGGGATATGTATTATTAAAGCTCACTTCTGTTACCACAGGTGTCACCAAATCGACCAGGATCTTAAGGAGTTAAAAGGGTTAGAACTGAAACATAGGTTGACCttctattttaacttttttctgTCCCTGCTTAAAAATgtaatgaggaggaggaggaagggggatATGGGAAATGAATGATACTGGTCGAGAACATTGGTTGTTGCTGGCTTTTTGCCCACTTGAGAACTTAAATGATGTAGAGATGAAAGCTCAGCGAATGTCCTTGTGCAACAATGTGTTGCTTGATTTTGATCTGCATCTCAgcacttttgttttttcttttgttttaaatgaccCATGTCATTTGGTTTCCATACGGCCAGCTCAACAGGGCGTACAGAAAAGAGCCATGTCAGGAGTTCTGAAATGCCACTTTATACTGGAAGAagatggtttgttttttttctgatgcgTGTGAATAAAAAGATTTTTGCAGATTTCTATCAGCGATGCATATCAATAGGAGGCATTACAGGAGCTGCAGTTATTGTAAGGAAACACTGGGATTGTTCTACTAGCAGCGTTAACGAATAGAATCCTCTCAAATCAAAGTCAATTTACACTCTCATCCTCTGCAGATGTTAttctaaggccggttacacactgcctgcgtggcgtggaGTTTGTCGCGTggcagctgcgtggatttttccacgcctttacacaccagaaacgtgtctgacaacaacgtaggcagtattgactgcaaaatgggctacagaattattttttttaattacattcatATCTGCATTCATATCAAAATCTATAGACTTtcaaacatgtcatttattaataggtatttgtgtctaaacgacaaACATcttttctattttgcctggaaacgcttcaaAACACCTAAATGTgtgtcggttctatttctagcaggcacgcgtttacGGCGCGGCTCGacgcgtgtcacgcaggcagtgtaaGCTCTAACCCGTTAACacgggagccgaaatataaactgacacgctcgcgcgaagCAGCCAGTGCGTAACCGGCCTAAGTCACCAAGTTTTCCTTTCTGTTAAATCTTTAACTTTGCTCCGACAACTACGTAGGCACGGTCTCCTAATGCAGCTACTGTCCTGCAACAGCCGGTCCAATAACTTgaatctagtaggctacttaactCTAACCTGCGATTGCTTCGTCTGCATCCTTACTCGGAATATTTTATTTCTGGATCTAACTACAAGACTGATCCAAGATCAGCACCTTTAggcaacttttattttttttcccccctctgcaGTGGAAACAGAATTGCTTGTTAACTCATCAAAGTGTTTGGTGAAGGACCAGATGCCCACAGCACTGTTAAATGTGTTGTTCCGGCCATCAGTTTGTCACGTGGCTGTCCCTTTTCCAACTctgtattttgtaaaaatcaGTGAGAATCATAGGTGGCATTACTGACCAATAATGTTATAGGGGTGTTACTGACAAATAATCTTCCTTAACAAATATGTACACAGAGCCATGTGTAACTGGGTGGAATGTCCTTAAAGACGTTGCCTTTCAGTCTTTTCTACATTTCTCCTCGTGCTTATCTTCATATTTGATGCGATGAGGTCAGGTGGTGTGCGTATTTTTCTTTCGGGTAGAGGACGGGTCTAGTTTGAGGGGGAAGACCTTTCGGCAtccatttcctctttctttggcGTTGCCCCAGATTGACTCTCAGGTAATGTCAGAATCTACCTCTGTAGGTGAGACTAACTGTGAAAGAAGAGGCATGAGTCACCATAGCTTTGGAGAGCTCTATTTTTACTATAAATGAGCCCACACACCCCCCCTTTGATTGTACAATGTTCTTATAGTCCTGTCTTGCTTTtcaataaacatttttgtaGAATTTGCAA

Function

NR:

description
PREDICTED: gamma-taxilin-like

GO:

id name namespace
GO:0019905 syntaxin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34734 False 3220 lncRNA 0.43 1 7002428 7005647
XM_039795921.1 True 5636 mRNA 0.46 8 6993956 7005678

Neighbor

gene id symbol gene type direction distance location
LOC120555501 NA coding upstream 498235 6493937 ~ 6495721 (+)
mtch2 mtch2 coding upstream 682816 6295097 ~ 6311140 (+)
trnal-uaa_1 NA coding upstream 941059 6052815 ~ 6052897 (+)
trnal-uaa NA coding upstream 941987 6051887 ~ 6051969 (+)
fadd NA coding upstream 961802 6026435 ~ 6032154 (+)
bnc1 bnc1 coding downstream 181051 7186729 ~ 7211577 (+)
sh3gl3a LOC100692766,LOC101467334,LOC103355412,LOC102293456 coding downstream 226870 7232548 ~ 7290870 (+)
LOC120555848 LOC107591295,LOC105891088 coding downstream 312231 7317909 ~ 7330702 (+)
adamtsl3 LOC101469981 coding downstream 349199 7354877 ~ 7670801 (+)
LOC120555922 NA coding downstream 769955 7775633 ~ 7783499 (+)
G25895 NA non-coding upstream 752 6992995 ~ 6993204 (+)
G25893 NA non-coding upstream 2025 6987512 ~ 6991931 (+)
G25888 NA non-coding upstream 14201 6974335 ~ 6979755 (+)
G25850 NA non-coding upstream 351973 6641450 ~ 6641983 (+)
G25827 NA non-coding upstream 403338 6590195 ~ 6590618 (+)
G25902 NA non-coding downstream 18188 7023866 ~ 7025761 (+)
LOC120556370 NA non-coding downstream 36505 7042183 ~ 7045161 (+)
G25942 NA non-coding downstream 292821 7298499 ~ 7298701 (+)
G25950 NA non-coding downstream 325032 7330710 ~ 7337252 (+)
LOC120555850 NA non-coding downstream 624444 7630122 ~ 7632825 (+)
rwdd3 rwdd3 other upstream 598250 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 704180 6262410 ~ 6289776 (+)
G25743 NA other upstream 705879 6287048 ~ 6288077 (+)
G25708 NA other upstream 958763 6034209 ~ 6035193 (+)
tshz3b tshz3 other upstream 2156671 4793815 ~ 4837285 (+)
G26205 NA other downstream 1748023 8753701 ~ 8760301 (+)
G26236 NA other downstream 2063051 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 2327551 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 2385430 9391108 ~ 9604462 (+)
asb7 asb7,LOC102792420 other downstream 2647900 9653578 ~ 9677027 (+)

Expression


Co-expression Network