G25950


Basic Information

Item Value
gene id G25950
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 7330710 ~ 7337252 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU34800
ACCAAACTGCatttataactttattaatttatttataactATTATGCTAAACAAGTTTTATTcgagacacacacatttaaaatgaaattaaatcaaGGCAAAGTTCATATCTTGTGCAGTTAGAGCGATGAAACGTGAGGAAAACTGAGGTGGGTACTGTTGCTCTAAGGCCTCGAAGCTGGTCACAGTCACACTAACAGCTCAATGTCCTGTATGCATGTACTGCAGTTTGTCAGAGTCCAGTTTGTTGTACGAGACAACAGCGGAACCAGACAGCAGCAGATGTTTTGTCCTCCAGAGGCGCTCCATGTTTCCTAGACGCACAGCAGAAATCACATGACCGCACAGCTCGCCTCCTTAGATCCAGATAGatCTGTCTCCGAAAGTGCTGGATGTCACTGCCCGCCACAAATTCCTCATCAAACTCCAATTCAGTGTCCTCATCACCCCTGTGCTGCATACACACCCTGCGCTCTGCTACttcctgaaaaaaaagaaaaagtgtagCACATTACTCCTATGGTGACTTACATCCAACActagggttaggtttgggtcaAATGTAGCATCTGTCATCAGCACTACAAGGGGCATTTTATTTTCAAGAAAATTGCATCAAAAATGGTCTTAGCAGCAAAGTACATCTCCTAGAATGCACGCGTGCACACTGCTCCACTTACCTCTTGGTTGGGGTTCAGAAGAATCACCCTGATCTCAGTGACGGGGCCCCAGCTCGTGTGGCCCTGCAGAATCAGGTCCCCAGGATCAGCCTCCGCCTCGGCACCTGCTGCccagatctgaccacacacacacacacacacacacctttgacagagcacttaaaaaaaaaaaaaaagtctgtacaGCAGATTGACAAAATACACAACTACCACAAAgcataaaatacattaaacaaatTCAGAGACCgaacatgagaaaaaaataacagcCATACAATAAAAACATGTGGGAGCGCCAAGAAAAACTGAAACTcgaccctccccccccccaaatatggactgcatttataaagTCCCCTATTTATTTAagtgttcagtgtcttgctcaaggacacttcaacacCCTCTTTGGAGGAGCCAGGGATCGAACTGGTGACCTTCAGATTACCAACAGACCTACCTCCTGAGCCGTGCCACCCCTAGTCTGGGCCAGCTGATGAACATTGctaggataaagcctgacatccaggATGTCCCTCCCCTCTCGCCATCTCTGCCAATCGGTGTTTAACGTCGCCCAGGATAGtcgtaattggtttaaagaaatctaaaacaagccagggtgttttttttccccctcctatcccagaatagatatgcagtgtagccagaccatactgcagcgctgtggagataggtctggctatGCAAGACTATGTCGCTACTAATAATCTAGGTGCATCTCTGTCTAATGTTCTCAcgcagggtttcccccagaaaagttgtttagcccAGTGGCAAGTGTCAGtgggttttttcccccccaaggGCAAGGCTCGGCCCAGTCctagactgatggcagcattaatgtagagcccaacagcttctgtgataacagaataATCGCAAAACTGAGAATTTAAAAAGGCTATAAGACAGACTCCATAGGAGcctacattaagtcagtgctgAAAGCTACGTCCAAGTTtacttaatacatttaaaagaataaaaaaataaataaaatccttGCCAGAAGCTTAGGCCTGATGGGGGGCAACTTAGGCCCAGTGGGTCACCAAGTTTACAATACACTGGGGGGGAAACCCTATCATGAGTTTATTTCTCTGTGCAAAGGGGGCTTATGGAAATACAGTTACACATAATGTTCTACTCACTGTGAGAGTCTGCCCAGCAGCCAGGATGTAGGAGGGGGGGATGTAGAAGGAGAGGTCCCCAGAGCCGGGGTACAACCTCCGGACCACCCAACCACCCAGTGGCTGCTCCTGGAAACACAAAACAGGACAGGGAGCAGTTGAATGACTTCACAgctagtttgggtggtgtcattttctttagtctgtggccAGCCAACAGGTACATTAGCTCTCCAAGCTAACGTTTGtcaaaggtaaaggtactttgtcacataacacatacatgtagcaaaattcattctctgcatttaacccatccctcaagggaacagtgggcagccatttctggggaccaactccagatctgagccagtagagaacctagtacatgttttttgatggtgggggaggaaacccacacaaacatggggagaacatacaaactccacacagaaaggcccggcacgacctggattcaaacccagaaccttcttgctgtgaggccatagtgctaaccattgggccaccatgctgccatCCATTCCTCAGCGTCGTTAAGTTGTACGTACGGGACGCAGGAGGTTTCTAGCCGGACGTTATTGTAAATAAACTTGGCGATTGGGTCTACAGGAACAGAAGTTAGTCATGTGTTCAGGAGCCAGATGTATAAATGATatgcaaaacacaaaaaccaTGCATGATCAAATTTCTCACACCCATTTATAAAGTGAGAATGTGTCCCCTTACGTATACTTCCTACCAGGCGAACACGCATTTTTTTAAGAGATAGCTGCGGGTGATATAAGGTAGACAAGAAATTAAGGTGATCGATTTAACTTTAtgaacaaaacatttatttaaattccAGCCATTATTTCCTTGTGTCAATAAACTTGATTTCATCCTgaattgtgaagcactttgtaaagtCAATGAGCTCTGACACTTAATATTTAGATATTGCACgataggcctgtaacaattatttaataactGTTGAATATTTAAGTAATCCCCATTTCTTTATTAAACCACAATTAATCTGCAAATAAGAGtcgtggtttacttcataggctgtgtacttctgttattacattatctgggtcacatgacagcaatataaccaaaagatgtaagtaagtaaagtttttGTATAGCATCTTTCACAGataaatcacaaagtgcttcacaataaaatgcaatacaacaaattaaaatacaagaatatttTAATACAAATCGAAAACAACCATAAAACCCCCTCGACTAACTAAAAGCCTGCTTGAATAGTCTTcaattgctttttaaaagattcgaCAGATTTCACACAACGTAAGAGGGAGGCAAgtcattccacagcctaggagccactGCTTGGAGTGATCGgtcccctctagttttaaaaaTGAGTGCGGGGAACCACCAATAGCCTctgacctaatgacctcagacTACGGGTGGGAGTATGAAGCTGTATCAAGTCAGAGATGTAGGGAGGAACTTGACCGTGAAGGGTTCTAAAAGTAAGGACcaggattttaaattgaattctagACTAGACTGGTAACCAGTAAAGTGATGCTACAACAGATGTGATGTGTGCTCTTTCGTTAATGTTAGTtaaaagccttgcagcagagttctgaacaGCCTGGAGACGGTAAAGCTCCTTCTTACTCAAAACAGGTGAAAAGACTGTTACAGTAATCTAAACGAGAGGAAATTAAAGCATCAATGATCATCTCCAACGCACCCTTTGAGACTAGTGTTCTTAATTTGGAAATATTCCTCAGTTGGAAGAAACCGTTAATAATTAATTGTTGAGTGGTGCTCCAAGGACATGGCTGAATCAAAAAAACACCTAAGCTCCTGAGACGAGCCTAAGTCACCAATATGCTGCTTTATCTGAGGGATTCTACTTCAGGGGCGATAATTAGTGTTAGTTTTATCTGAGTTCAGAAGCAAAAAAGTTGTCACATAACCACTGTTCGATACTAGTCAAGCAGTTAATTAAAGAAGACAGTTTATAGAACTGTTTCCTTAAACGAGCAGTACAGTTGAATATCATCCACATACAGATGGTAAGATATGTCGCTAAATTGACTAATTATTTGTTCTAGAGGAAATGGCTACAAGAGGAACAGAATAGGTCCCAAGACAGAACCCTGAGGTACCCCACACAACaactctgcagtttcagaaattATCTGATTCACATAAACACTAAAACTTCTACCAGAAAGGTAGGatgaaaaccattttaaaactgatCCAGACATCCCAACCAGATCACAAAGTCTATTTATCATAATATTATGATCAATCAAGGGTCAAAAGCAGATGAGGTCCAATAGGACCAAAACTGTATATTCCTTAGAGTCAGCTGACATAATATCACTAGAAACTTTAAGTAGTGCAGTTTCCGTAGAATGCTTAACGGAAACCATACTGGAATTTGTCAAACAACTCGTGATTCTGTAGGAAAAGGGTGAGTTGCTGTGCTTCAACTTTTTCCAGAATTTTTGACATGAATGGAAGTTTGGATATTGCCCTGTAGCTCTTAGGTTGTAGTGGATCCAAACTGGGCTTTTTAAGTACAGGCTTAACaaaagcatgtttaaaaaaataaataaataaataaaaatactagGAACGACACCAGTTAAAAGTGAAGTATCAAGCAGCTCAACAATACAGGGGCCAATGGAGTCAACGCTTGTACAAATAGCACAGTAGGGACAACATCCATAGGACAAGATGAGGGTTTCAATGTATGTAGCAGAGAGGTGATATGTAATGTCACAGGTTTAAAAGTGGACTAAGAATGAGTGGGAGACAAGTTACAGGCAGAGTTCTGAGAAAGTGATGGTGAGATGTTTGCCCTAACATCTCTGATCTTATTTACAAAGAAGTGGAGGAATTCATTACAGTCCAATTTAGATGACAGTTGCTTGAGGGCCAGAAGGAGAAACTATTGCATTAATGGTGTCAAATAAGAGTCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34800 True 4842 lncRNA 0.42 2 7330710 7337252

Neighbor

gene id symbol gene type direction distance location
LOC120555848 LOC107591295,LOC105891088 coding upstream 8 7317909 ~ 7330702 (+)
sh3gl3a LOC100692766,LOC101467334,LOC103355412,LOC102293456 coding upstream 39840 7232548 ~ 7290870 (+)
bnc1 bnc1 coding upstream 119133 7186729 ~ 7211577 (+)
LOC120555501 NA coding upstream 834989 6493937 ~ 6495721 (+)
mtch2 mtch2 coding upstream 1019570 6295097 ~ 6311140 (+)
adamtsl3 LOC101469981 coding downstream 17625 7354877 ~ 7670801 (+)
LOC120555922 NA coding downstream 438381 7775633 ~ 7783499 (+)
efl1 efl1 coding downstream 601960 7939212 ~ 8069667 (+)
mex3b mex3b coding downstream 803632 8140884 ~ 8146927 (+)
LOC120556467 tmc3 coding downstream 1208009 8545261 ~ 8601678 (+)
G25942 NA non-coding upstream 32009 7298499 ~ 7298701 (+)
LOC120556370 NA non-coding upstream 285549 7042183 ~ 7045161 (+)
G25902 NA non-coding upstream 304949 7023866 ~ 7025761 (+)
G25895 NA non-coding upstream 337506 6992995 ~ 6993204 (+)
G25893 NA non-coding upstream 338779 6987512 ~ 6991931 (+)
LOC120555850 NA non-coding downstream 292870 7630122 ~ 7632825 (+)
LOC120555849 NA non-coding downstream 295579 7632831 ~ 7634497 (+)
G25959 NA non-coding downstream 328544 7665796 ~ 7673941 (+)
LOC120555855 NA non-coding downstream 376047 7713299 ~ 7716158 (+)
G26025 NA non-coding downstream 497651 7834903 ~ 7835181 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other upstream 325032 6993956 ~ 7005678 (+)
rwdd3 rwdd3 other upstream 935004 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 1040934 6262410 ~ 6289776 (+)
G25743 NA other upstream 1042633 6287048 ~ 6288077 (+)
G25708 NA other upstream 1295517 6034209 ~ 6035193 (+)
G26205 NA other downstream 1416449 8753701 ~ 8760301 (+)
G26236 NA other downstream 1731477 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 1995977 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 2053856 9391108 ~ 9604462 (+)
asb7 asb7,LOC102792420 other downstream 2316326 9653578 ~ 9677027 (+)

Expression


Co-expression Network