G25959


Basic Information

Item Value
gene id G25959
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 7665796 ~ 7673941 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU34815
agattccagatcggcccatctgagctttcattttctcaaaggcagagcaggatacccagggctcggtttacacctatcaccatttctaaccactgggggaccaaaggcagactgggggaacgcatattaatgttaaaaaaactcataaagtgaaattttcatgccatgggaccatTAAATAGCAATACGGAAAGTATCAGTTCTCACATGTTTGCACCATGGTTTCTCTCAAACTTTGAACactgaaaaatgtaatgcatgatgAGGTTGGACTTTACAGCCAGTTAgtaacacatacaaacatgtaTTCTTTGGTGCAgataccaaaatgtaaaaaaatacagttatgaaagagttcttaatttgtgtttcttcagattgcattgagtagaccccataaagttatcctacaactgattttgatactgtactgtatggatggtagctacaggacatgctttgaattcataagatttaacaatacagtgttagggacagatcagatggccagagacttgagacttgacttggactcgtggcaaaagacttgagacttgacttgaactaaCCGCTCAAAGGCTTGAGACTcaacttggacttccaaaaaatgacttgtgaacatctctggtgTGCACGTGTCAGTCGtggggggaactgagcagcagccccgcctgctaggattgaaacagcagcagcttccagccactttagagtgaaaaaaacgTTAAAGCGTACGTTGATGTTAAAaggtatacaggttggcaggacggtcatAAATGTTCTGCACGGTCTtttgctgtacgttttgttgtaAATTTGAGATGTTTGAGTCACGCaggtctcgtcttcatatcagaaacaaggaaatgaatttggcgaCGCATGTGTGTTatgtcaacccgttctcactcccgctttgccagtggctctcagagtacgcctcagagtcacatactgaCTCAatgtctggcacgtgggactgatgggattggttgaagtaaCTTCTGGTTTATTGGTCAATTGTTCagaaaagttgcggtgattggtcaaaattgcgaatCACGGTAAATTTACAGGATTGGTTGAATTCATGTGAATTGTTGCGATCGCGacatcgcgaaatcctggagggactgattaaagggtaattttttattttattttttaatctggACAAAAACAGatggacctttttgttaaagagtaagacaTCCCTGAAATTGCTATCGCCAAACCCACTAGAgtctatttaaataaacagtcattttatttCGTGAAATACACTtgattcaaagtcgacagaaacaaaataaatcaaaagccTAAGTCTTGTGCTTACTTTATAAAAGCAATGTCAGGTGATATATAAAACAGAATTTAGAATCAAAATCCTTAAAGACCATTCACTTGAGTGAAGGTTCTGGTTTGTGATTGTAGTCACATGTCACTGATGAGAAaagagctgctgctgttggtgGAGCTCCAGTTGTGAGAGTATGAATTCATATGCACATATTCACTAACACCACTTATGATTTTAAACCATGACCAGaaggttttgtaaaaaaaatgatttcgATATTACACATAACTGTTTGCTCATTGAGGCAAACCTGACTCCAGACAGAGAGGCACCAGCACAACACTGATTTTGACTGATGGTCTATTCATGGTCTATTCATGTTACCTTTGTGTTGGTTATCATACCGATGTGCTGCATTGTAAAATGTCTTGTATATACTGTGTTCTAAGTGCAATATCGTATATTGAGTGTATGTAGATTGTGTGCaacttttattttcttacttATTCATGGTTAAGGTGTCTTTTTAACAACTGTTAAAGATCCTAGAGTATAAAGCATGTGTATATGTTGATTGGGTGGTATGTTTGCTACCACTCACCTggttttatttgcatgtgtaaaAGCGCAATCTTCGATCTTTTATACTCAACAAGCAACCCTCAGTGTTGACCCCTGGctagatacagtatatctgaTGTGGTGACTTTTTGACTGAAAGAATATGAGGTAGAACGACAAATCATTTAAGTGCTTTAGATAACAAGGCAAAGGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34815 True 2083 lncRNA 0.39 2 7665796 7673941

Neighbor

gene id symbol gene type direction distance location
LOC120555848 LOC107591295,LOC105891088 coding upstream 335094 7317909 ~ 7330702 (+)
sh3gl3a LOC100692766,LOC101467334,LOC103355412,LOC102293456 coding upstream 374926 7232548 ~ 7290870 (+)
bnc1 bnc1 coding upstream 454219 7186729 ~ 7211577 (+)
LOC120555501 NA coding upstream 1170075 6493937 ~ 6495721 (+)
mtch2 mtch2 coding upstream 1354656 6295097 ~ 6311140 (+)
LOC120555922 NA coding downstream 101692 7775633 ~ 7783499 (+)
efl1 efl1 coding downstream 265271 7939212 ~ 8069667 (+)
mex3b mex3b coding downstream 466943 8140884 ~ 8146927 (+)
LOC120556467 tmc3 coding downstream 871320 8545261 ~ 8601678 (+)
stard5 stard5 coding downstream 930335 8604276 ~ 8621712 (+)
LOC120555849 NA non-coding upstream 31299 7632831 ~ 7634497 (+)
LOC120555850 NA non-coding upstream 32971 7630122 ~ 7632825 (+)
G25950 NA non-coding upstream 328544 7330710 ~ 7337252 (+)
G25942 NA non-coding upstream 367095 7298499 ~ 7298701 (+)
LOC120556370 NA non-coding upstream 620635 7042183 ~ 7045161 (+)
LOC120555855 NA non-coding downstream 39358 7713299 ~ 7716158 (+)
G26025 NA non-coding downstream 160962 7834903 ~ 7835181 (+)
G26028 NA non-coding downstream 172560 7846501 ~ 7846739 (+)
G26063 NA non-coding downstream 439245 8113186 ~ 8113391 (+)
G26075 NA non-coding downstream 543045 8216986 ~ 8217378 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other upstream 660118 6993956 ~ 7005678 (+)
rwdd3 rwdd3 other upstream 1270090 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 1376020 6262410 ~ 6289776 (+)
G25743 NA other upstream 1377719 6287048 ~ 6288077 (+)
G25708 NA other upstream 1630603 6034209 ~ 6035193 (+)
G26205 NA other downstream 1079760 8753701 ~ 8760301 (+)
G26236 NA other downstream 1394788 9068729 ~ 9155343 (+)
cers3a cers3,LOC102798777 other downstream 1659288 9333229 ~ 9378611 (+)
adamts17 adamts17 other downstream 1717167 9391108 ~ 9604462 (+)
asb7 asb7,LOC102792420 other downstream 1979637 9653578 ~ 9677027 (+)

Expression


Co-expression Network