LOC120555934


Basic Information

Item Value
gene id LOC120555934
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 8494353 ~ 8496635 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35011
GGAGGAAGTCCAACGGTCAACGCCAGACGGAGGTTCGGGTGCCAGCATGTCTTGCTGACTATCAGCAACACATGAAGGGAGTTGATCTTCTGGACCAGATGGTGGGCTACTACCAGATCCATCATCGATCTACGAAGTGGTGGAGGAGGCTCTTCTTTTACTTCATTACGGTGGCGTGCTACAATGCCTTTGTGGCTGCCAGGTCTGCGG
>XM_039795142.1
ATGGCTACGGCAGAGGAGGATTTTGACAGCGAGGGCAGTGACATTGAGTTGGAAGATAGTGATGAGTTTGAgttggagagggaggaggaggatggtgTTGATGAAAACATGCAAGATGATCCGTTGGATAGAGCACAAGAGTGGGATGTGtgggacacagacacagaaggagaggaggatgacTTTCACGGATTCCACGTAGACTGGAGAACCGAGGATTATCAGCCGCGCAAGGCGAAGCAGTTCACCCGCAAACCGGGGGTGAAACAGCCGATCCCCGTGGACGCTAGCCCCCAGGATGTCTTTTTGCGTATTTTCACCGATGATCTTTGGGACATGTTGGTGACTGAAACTAATCGGTACGCTGAACAGACGCGCGGTCAGACCCCCACCAATTCGAAGTGGAACCCTGTCTCCAAAACGGAGATGAAGACATTTGTCGGGCTGTGTCTCGCCTTCGGTATTTTGAAGCTGCCAGCACGCAGGGATTTCTGGAGGCAGACTAAATGGCTGTACCAGACCAACGTCCCCAAGGCCATGGCAAGGGACCGTTTCGACATGATCTGGAGATATCTCCATCTCCAAGATAATATTGATCCTGTCGTGGACAAGACGGACAAGCTGTGGAAGATCCGGCAGTGGATGGACTTCCTCCTGGTTAGGTTCCAGGCACTCTATGAGGTCAATGGTTTCGTGACCGTGGATGAGTCCATGGTGAAGTACAAGGGACGCCTGGGCTTCCGGCAGTACCTCCCCATGAAGCCGGTGAAGTGGGGTATAAAGGTGTGGGTCATGGCCGAGAGCAAAACGGGCTATGTCACCAATTTTGAGGTGTATACGGGGGCCATTCAGGGTAAGGCAGAGAAAGATCTGGCTCACCGCATAGTGTCAGACCTGGTGACCCCTTATTATGGGTCCAACCTTTCGGTATATATGGACAACTTCTACACCAGTGTGAAGTTGATGGTGGACCTCAAGGTCAGGGGGGTGCAAGCGTGTGGAACGGTGCGTGCCAACAGGAAGGACCTCCCCAAAAATGAGCAGCTGACAAAGAAGGCTGAGTTGAAAAAACATCAGTTTAATGTGGCACAGCGGGATGAGTTGACCTTCTGCGTCTGGCAAGACACCAAGGCAGTGATGGTCCTCTCAAACTACCATGACCCGACAGCTCATGGGTTAGTGAGGAGGAAGTCCAACGGTCAACGCCAGACGGAGGTTCGGGTGCCAGCATGTCTTGCTGACTATCAGCAACACATGAAGGGAGTTGATCTTCTGGACCAGATGGTGGGCTACTACCAGATCCATCATCGATCTACGAAGTGGTGGAGGAGGCTCTTCTTTTACTTCATTACGGTGGCGTGCTACAATGCCTTTGTGGCTGCCAGGTCTGCGGGAGGAGCCGAGTGGAAGTATAGGAGGGGCGGCTACAAGGATTGGCTGGAGGATCTGACCCAGGAGCTGATCGTCCCTGTCACTGCAAGAAGTGCTCCCAATGTTCTCCCCACCAGCCCAACTGGAGCTTCTGCTGAGCATGACCTGGTACAGCTCAACAATAAGAGGAAGACCTGCAGGGAGTGTTCTCTAAAGCACTGCGGCACCAACGTGCGTCCTGGATCAACGCTGATGGGGTGCAAGCAGTGTAACCTTCCTCTGCACCGCGAGTGCTTCATGCACCATGTCCTTCGCCACAAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35011 False 210 lncRNA 0.54 1 8494655 8494864
XM_039795142.1 True 1695 mRNA 0.53 2 8494353 8496635

Neighbor

gene id symbol gene type direction distance location
LOC120555843 LOC104937892 coding downstream 1188023 7304084 ~ 7306330 (-)
LOC120555919 NA coding downstream 1441876 7045853 ~ 7052477 (-)
hdgfl3 LOC103366351,LOC102309090,LOC101465811,LOC100694012,LOC106907470 coding downstream 1452212 7028566 ~ 7042141 (-)
LOC120556367 LOC104932139,LOC100695351,LOC108237907,LOC102197162,LOC103129685,LOC106520888,LOC101465514,LOC103366349,LOC102224277 coding downstream 1471181 7005842 ~ 7023172 (-)
LOC120556364 NA coding downstream 1511992 6970278 ~ 6982361 (-)
arnt2 arnt2 coding upstream 656607 9153242 ~ 9229577 (-)
fah fah coding upstream 811962 9308597 ~ 9325288 (-)
chsy1 chsy1 coding upstream 1631343 10127978 ~ 10231722 (-)
selenos NA coding upstream 1736829 10233464 ~ 10241227 (-)
zgc:113274 NA coding upstream 1747489 10244124 ~ 10245386 (-)
LOC120555518 NA non-coding downstream 3612 8490284 ~ 8490741 (-)
LOC120556139 NA non-coding downstream 93867 8396268 ~ 8400486 (-)
LOC120555295 NA non-coding downstream 106666 8386976 ~ 8387687 (-)
G26099 NA non-coding downstream 123445 8370581 ~ 8370908 (-)
G26088 NA non-coding downstream 265608 8228530 ~ 8228745 (-)
LOC120556469 NA non-coding upstream 55844 8552479 ~ 8558754 (-)
G26232 NA non-coding upstream 339429 8836064 ~ 8836909 (-)
G26278 NA non-coding upstream 750472 9247107 ~ 9247424 (-)
G26299 NA non-coding upstream 800123 9296758 ~ 9297750 (-)
G26322 NA non-coding upstream 846910 9343545 ~ 9344861 (-)
G26071 mex3b other downstream 347452 8144207 ~ 8146901 (-)
lmnl3 LOC104943683 other downstream 1149597 7330708 ~ 7344756 (-)
dok4 dok4,LOC102198948,LOC100694825,LOC102775855 other downstream 1801022 6642164 ~ 6693331 (-)
tpcn2 tpcn2 other downstream 1903714 6534042 ~ 6590639 (-)
pop4 pop4,LOC105418436,LOC104960843 other downstream 1969998 6509259 ~ 6524355 (-)
il16 LOC102796330 other upstream 133973 8630608 ~ 8697622 (-)
tlnrd1 mesdc1 other upstream 236784 8733419 ~ 8758808 (-)
LOC120555589 cemip other upstream 262966 8759601 ~ 8979144 (-)
G26298 NA other upstream 798433 9295068 ~ 9296746 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 2979871 11476506 ~ 11510300 (-)

Expression


Co-expression Network