cers3a (cers3,LOC102798777)


Basic Information

Item Value
gene id cers3a
gene name cers3,LOC102798777
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 9333229 ~ 9378611 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35205
CTGCTTTCcggaggggagaaaaaaaaccttccCAGGTGATTGTGGCTGGGCTGGGTGTGACCCTTAAGAATGTCAAACAAAGAGAGAGTGGCTGGCTGCTTGTCCTAACGGGGGAATAGAGGATTTTACCATCCGTGTTAATTTCCCACAGCAAGCACAGCAGTCAGCCGGCGTGGAAACAACGGCCCTCACCTGCTCTCTCTGACAGCACTGACAGTGGAACGGTGGATAGCAACACCAATTGCTGTCTCTGCTGGGATCAAGCAAAGAGTCCATCTGAAAGCAGAAGACAACCCCATCTTGGAACATTACTACATTACTCAGTGTAGAAATCCTGCTCAGGCAGACATTGATGGGCTGTCTAAGAAAAGCAGTTTGTCAGTGAGACAAGTTGAACGCTGGTTCAGAAGAAGACGCAGTCAGGACCTTCCCGGAGTCCTAAAGAAGTTCAGAGAGGCCAGCTGGAGGTTTGTCTTCTACCTGTTGGCGTTCATAGGAGGAATAGTAGCACTGTACGATAAAGAATGGTTTTATGACACTCGGGAAGTGTGGACAGGTTTTCCAAAGCAGGCATTGATGTGGACAACTTGTACTTCTGGTCAATTTTCACTTTTATACTAGATACTAGAACAAACTCCATGGGCCCCATTTGTCTATATGTGAATATGTTTATTACAAAATCTCACATCATACAGAATCAGTATTAAACTACAGTTTATACCTGACACAGTTTTTCAGCCTCACATGTGACTTAATAGAAATGAGGACAGACAATTAAAATGTGCTTTACGCTGAAAGGCAACAGTTTCTccttaatataatattatctATGATAGGCTACAGGTTAAAGGGGAAATAACAGCTCATAACGAGAGTAGAACTTTGCAGCAGCATATTATCCACCATTACCTCAAGCATTGCTGTTGCCGGTCTGCAGAGGACTGAGTCTAGTACATCAAAATACGTCCCTTAGGTCTTTTGGTCCCTGTACCCCATTTTCAGTTGATTTAGTTTGCTGTTGATTTGCTTGACAGTTCTGTTGAACCCTGCTGCAGCCATCTCACGCTGTAATTGTTTAAACACCAGTTCTGCTTTTGAAGATCCCTCTGGGTTATTTTAAGCTGCTGTCGAGGACCATAATGCAAGGTGGCTGTTTGTCTCCTACACAGACCACTCCTGTGGTTTCATGTccttactgtttttttaaaatggcgCTCATAaagtagcctggaaatccagacacAAATCCGAaggattaagggtctggcattgagtaatgaaaatggcccaactcaaGGGGAAGCatcaagcatgcatttgaaaatctcactgcaaaCAATTGGATAACAcaacgaccaatcacaacaatacacggggtggcgtatccagagccccatcCGCTTAGCTACctgcggagctaactggtagattaaattGTCGTcatgtttagctcgcctctggcccgcctatatcagatacaccgatgattggtgcagctcggctacaagtgCATAGTTAATGAacatcattactcaatgccagagtgactcgctgagcaaattcaaattgtgctcttgcAAGAACTCTGTATTTGGTCACAATAATTCGACCCCCAACCCATGACATCAGTGGTTCTTGGTTCTAAACGAGCAAAGTGTTTGTGCCACTCTGGAACCAGTTTTCCTGACCAAGAAGAGATTATTTGGCTGTCGAAATGCAAAGAACTGGTTTAAGAGTAGGCATTGGCTCCAAAACGGCCCTCAAACTGCCTCAGTGGAAAAGGGGTATGCGACACCTTGTCTGCTGCTAGTTTGTTAGCCTCAAAGCAGGCATAGAAGACATTGATCCTTTCGGCCAGAGAGGTGTCAGCAGTCTCCCACCTGGAGGAGATTGTTTTGTAATCTGTTATGCTCTGTGGTACCTGCCACAAGCGTTTGGAATCAGTTCTAGGTTAAACATTTCTGCTCATTCATTCTCAATACATAATATAACCAGTCACTAGGGCTGGACgatttggagaaaatcaaatatcacgatattttttaccaaatatttttaccgcaacgatattgtagggttgactattggtgctttcacaaaatatttacacaatgagatttttgataaataataagtaatgtggatataatgactaagtgggtaaaggcccAGCCCAGCTCTACCagccactcagcctctctgtcccactacacaacattttaaacatgttaagcTTAATGAGGCTCTGCAGTCACAACTGTGGCAGGGATTACTGTCACAAACAGCAGAAAGTCCTCAGACACCTCACTGAAGGTAAAAGTTAAGTCACCACTGAAGGATCCACCATGAGCATATTAGCAGTTAGCATTTTAGCTAGACCCAGCATGCACCTGTTACATTGGCCACGTAACATTGTGGGTGTTTGTTTTTGGTCACTTAACATGCTCACAGGGTGGTCAGTAGTCAGTGATAAAAcacttttagtttttattttattttacctacGTCGATACAAAATAATCTTAATTATAACCTGTAATGACAtcattctttattttaatatattgtgCATTTTTTGTACTGATGACAAACTGCTAGGCCCAGCCTGATCCCTGAAACTCAGCCTGTAAACATACATCTTGAACATGTATCTTCTCCAGAATGTCAGTTGAATGCTGAGAAACACCTCTCTGGACATAAAGCTCTCTGGGGCTCTGCCCTCATGTGGCGCAGACACACCAGCAGCTGGTGATTTCTTCATGTGACTTATTGTTTTTACTCTGTAACTTATGCGACTTGAAATGTAGCAATGTACAAtacttgaaataaaaaatattccAG
>XM_039795961.1
TCTGCTTTCcggaggggagaaaaaaaaccttccCAGGTGATTGTGGCTGGGCTGGGTGTGACCCTTAAGAATGTCAAACAAAGAGAGAGTGGCTGGCTGCTTGTCCTAACGGGGGAATAGAGGATTTTACCATCCGTGTTAATTTCCCACAGCAAGCACAGCAGTCAGCCGGCGTGGAAACAACGGCCCTCACCTGCTCTCTCTGACAGCACTGACAGTGGAACGGGTGGAGGGATGTTTGACACACTGTATGAGTGGTTCTGGTGGGAAAGAATATGGCTGCCTGTGAACCTGACATGGGCTGACCTGGAGGACAGGGAGGGCTGGGTCTATGCCAAAGCCTCACACCTCTACGTCACTGTCCCCTACACCTTTGCTTTCTTACTCATCAGATACCTGTTTGAAAGGTGGATAGCAACACCAATTGCTGTCTCTGCTGGGATCAAGCAAAGAGTCCATCTGAAAGCAGAAGACAACCCCATCTTGGAACATTACTACATTACTCAGTGTAGAAATCCTGCTCAGGCAGACATTGATGGGCTGTCTAAGAAAAGCAGTTTGTCAGTGAGACAAGTTGAACGCTGGTTCAGAAGAAGACGCAGTCAGGACCTTCCCGGAGTCCTAAAGAAGTTCAGAGAGGCCAGCTGGAGGTTTGTCTTCTACCTGTTGGCGTTCATAGGAGGAATAGTAGCACTGTACGATAAAGAATGGTTTTATGACACTCGGGAAGTGTGGACAGGTTTTCCAAAGCAGTCCATGCTGGAGTCTCAGTACTGGTATTATATCTTGGAGATGAGCTTCTATGGCTCTCTTCTCTTAAGCGTTGCCTTTGATGTCAAGAGAAAGGACTTTAAGGAGCAAATCATCCACCACTTGGCCACACTGGTTCTCTTATCATTTTCCTGGTGTGCCAACTACATTCGTATTGGAACACTGGTCATGATCGTCCATGATGCCTCTGATGTTTTATTGGAGTCTGCCAAATTATTCAACTATGCCAAATGGGAGAAAACCTGCCAAAGTCTTTTTGTTCTGTTTGCCATGGTGTTTATGGTAACACGACTGATCATCTTCCCATTCTGGCTGATCCACTGTACCTGGGTCTACCCTGTTCAACACTACCCTGCCTTCTTTGGCTACTACTTCTTCAATGTGATGCTGGTGGTCCTTCTCTGTCTGCACATATTCTGGGCCTACCTCATTCTCTGCATGATCAGAAAATTCATGTTTGGCACTCTGACCAGAGATGAGAGAAGTGACattgaagaggaagaagaggaagagagcagCCTGACAGAGGATGAATGTAAGGACGAGCACAAGCTTGGCAATGGATTGACAGTTGGTGAGAAGAAGGACAAGAGAAACGGCTTTCAGTGCTCGTCTCCACCAGAGAACATCTGCCGGTCAAAGACTGTGTACTGACTTGTGCTCAGTATGATCACTAGAGCCAGAGAGATGTGAGAAATAGAACAATGGcaaattttttcaaaacatttcatacaatatggaccaaaaaatAAGTTTCTTCAGATGCTGGAACACAAAGCCCAGAAAATTGCTTGCTGTTTTCACAGTGCTTTGAACTGCACACACGTACAACGAGAGACTTTAGCTGTATTCGCACAGGACTAGTATTACCAGGGGACCTCATGTGATTTACAAATAACTCCCCCACATCTTTGCTTCGTGTAGCACATTCGAGGTACCCCCCAGGTTTCCacaagttaaatttaagactttttaagaacATTTAGAATCAAATTTAATACCTTAACTTCATGGCCATACTAGCAAAAGTATATAGGATATTACGGAATATCAGAAAGGATTTGACGCTATAAAAAGAGTTATTTACCAAGTACttaaatttaacattttattgtagTACTCATAGCAAGTATGCATACATGCTTTGTGACGAAACAATGGAGTTATTCAATCGTATGAAAGGACAATACATATTTTAGACCTTTGTGAACTAAATTTAAGACTTTCTAAagaaatttaagacttttaaggccttatttttggaatatttattttttagagtTTTAAGACCCCGCAGGTACCCTGGCGAAATATGGTGGGTAATTAGTGGTggacagtgttggggagtaacggaatacatgtaacggcgttacgtattcagaatacaaattatga
>XM_039795962.1
TCTGCTTTCcggaggggagaaaaaaaaccttccCAGGTGATTGTGGCTGGGCTGGGTGTGACCCTTAAGAATGTCAAACAAAGAGAGAGTGGCTGGCTGCTTGTCCTAACGGGGGAATAGAGGATTTTACCATCCGTGTTAATTTCCCACAGCAAGCACAGCAGTCAGCCGGCGTGGAAACAACGGCCCTCACCTGCTCTCTCTGACAGCACTGACAGTGGAACGGGTGGAGGGATGTTTGACACACTGTATGAGTGGTTCTGGTGGGAAAGAATATGGCTGCCTGTGAACCTGACATGGGCTGACCTGGAGGACAGGGAGGGCTGGGTCTATGCCAAAGCCTCACACCTCTACGTCACTGTCCCCTACACCTTTGCTTTCTTACTCATCAGATACCTGTTTGAAAGGTGGATAGCAACACCAATTGCTGTCTCTGCTGGGATCAAGCAAAGAGTCCATCTGAAAGCAGAAGACAACCCCATCTTGGAACATTACTACATTACTCAGTGTAGAAATCCTGCTCAGGCAGACATTGATGGGCTGTCTAAGAAAAGCAGTTTGTCAGTGAGACAAGTTGAACGCTGGTTCAGAAGAAGACGCAGTCAGGACCTTCCCGGAGTCCTAAAGAAGTTCAGAGAGGCCAGCTGGAGGTTTGTCTTCTACCTGTTGGCGTTCATAGGAGGAATAGTAGCACTGTACGATAAAGAATGGTTTTATGACACTCGGGAAGTGTGGACAGGTTTTCCAAAGCAGTCCATGCTGGAGTCTCAGTACTGGTATTATATCTTGGAGATGAGCTTCTATGGCTCTCTTCTCTTAAGCGTTGCCTTTGATGTCAAGAGAAAGTCTGCCAAATTATTCAACTATGCCAAATGGGAGAAAACCTGCCAAAGTCTTTTTGTTCTGTTTGCCATGGTGTTTATGGTAACACGACTGATCATCTTCCCATTCTGGCTGATCCACTGTACCTGGGTCTACCCTGTTCAACACTACCCTGCCTTCTTTGGCTACTACTTCTTCAATGTGATGCTGGTGGTCCTTCTCTGTCTGCACATATTCTGGGCCTACCTCATTCTCTGCATGATCAGAAAATTCATGTTTGGCACTCTGACCAGAGATGAGAGAAGTGACattgaagaggaagaagaggaagagagcagCCTGACAGAGGATGAATGTAAGGACGAGCACAAGCTTGGCAATGGATTGACAGTTGGTGAGAAGAAGGACAAGAGAAACGGCTTTCAGTGCTCGTCTCCACCAGAGAACATCTGCCGGTCAAAGACTGTGTACTGACTTGTGCTCAGTATGATCACTAGAGCCAGAGAGATGTGAGAAATAGAACAATGGcaaattttttcaaaacatttcatacaatatggaccaaaaaatAAGTTTCTTCAGATGCTGGAACACAAAGCCCAGAAAATTGCTTGCTGTTTTCACAGTGCTTTGAACTGCACACACGTACAACGAGAGACTTTAGCTGTATTCGCACAGGACTAGTATTACCAGGGGACCTCATGTGATTTACAAATAACTCCCCCACATCTTTGCTTCGTGTAGCACATTCGAGGTACCCCCCAGGTTTCCacaagttaaatttaagactttttaagaacATTTAGAATCAAATTTAATACCTTAACTTCATGGCCATACTAGCAAAAGTATATAGGATATTACGGAATATCAGAAAGGATTTGACGCTATAAAAAGAGTTATTTACCAAGTACttaaatttaacattttattgtagTACTCATAGCAAGTATGCATACATGCTTTGTGACGAAACAATGGAGTTATTCAATCGTATGAAAGGACAATACATATTTTAGACCTTTGTGAACTAAATTTAAGACTTTCTAAagaaatttaagacttttaaggccttatttttggaatatttattttttagagtTTTAAGACCCCGCAGGTACCCTGGCGAAATATGGTGGGTAATTAGTGGTggacagtgttggggagtaacggaatacatgtaacggcgttacgtattcagaatacaaattatga

Function

symbol description
cers3 Enables sphingosine N-acyltransferase activity. Involved in ceramide biosynthetic process and keratinocyte differentiation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum. Implicated in autosomal recessive congenital ichthyosis 9.

NR:

description
ceramide synthase 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35205 True 2841 lncRNA 0.43 6 9333230 9348325
XM_039795961.1 False 2166 mRNA 0.43 11 9333229 9378611
XM_039795962.1 False 2037 mRNA 0.43 10 9333229 9378611

Neighbor

gene id symbol gene type direction distance location
LOC120556464 NA coding upstream 36512 9261211 ~ 9296717 (+)
abhd17c abhd17c,LOC102793890,LOC100694079 coding upstream 241719 9056333 ~ 9091510 (+)
mesd mesdc2 coding upstream 582349 8745162 ~ 8750880 (+)
stard5 stard5 coding upstream 711517 8604276 ~ 8621712 (+)
LOC120556467 tmc3 coding upstream 731551 8545261 ~ 8601678 (+)
lins1 NA coding downstream 253396 9632007 ~ 9642958 (+)
lrrk1 lrrk1 coding downstream 482541 9861152 ~ 10096639 (+)
LOC120555943 LOC103372586 coding downstream 1046552 10425163 ~ 10465554 (+)
LOC120555947 hnrnpab,LOC100707314,LOC102779500,LOC101480042 coding downstream 1105852 10484463 ~ 10485311 (+)
LOC120555948 LOC103462314 coding downstream 1149227 10527838 ~ 10609081 (+)
G26297 NA non-coding upstream 33022 9299488 ~ 9300207 (+)
G26276 NA non-coding upstream 88776 9240665 ~ 9244453 (+)
G26273 NA non-coding upstream 94664 9236352 ~ 9238565 (+)
G26218 NA non-coding upstream 512245 8820753 ~ 8820984 (+)
G26217 NA non-coding upstream 516613 8816407 ~ 8816616 (+)
G26335 NA non-coding downstream 82306 9460917 ~ 9473100 (+)
G26347 NA non-coding downstream 228132 9606743 ~ 9608997 (+)
G26367 NA non-coding downstream 343612 9722223 ~ 9722683 (+)
G26368 NA non-coding downstream 348581 9727192 ~ 9727740 (+)
G26386 NA non-coding downstream 367526 9746137 ~ 9791753 (+)
G26236 NA other upstream 177886 9068729 ~ 9155343 (+)
G26205 NA other upstream 572928 8753701 ~ 8760301 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other upstream 2327551 6993956 ~ 7005678 (+)
rwdd3 rwdd3 other upstream 2937523 6382570 ~ 6395706 (+)
LOC120555541 NA other upstream 3043453 6262410 ~ 6289776 (+)
adamts17 adamts17 other downstream 12497 9391108 ~ 9604462 (+)
asb7 asb7,LOC102792420 other downstream 274967 9653578 ~ 9677027 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other downstream 436086 9814697 ~ 9860000 (+)
lto1 oraov1 other downstream 2524661 11903272 ~ 11912722 (+)
G27086 NA other downstream 3731146 13109757 ~ 13110339 (+)

Expression


Co-expression Network