G26347


Basic Information

Item Value
gene id G26347
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 9606743 ~ 9608997 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35243
aaaaagtctcattgcagtgtctgaaatatgagacctgctgtctcgtctgTGTATGGGGTTCGCTCAACCAaacagcgcgcagctcatctaaatattcatgagcataccatatttggaagaaaagctctcgttccaaatagggccaaaacacagggatgcataagggcccataaaatagcaaccgggccattttcagcccaatcaATGTTACACACCCTATTaagagaccttaaggaacagtgtgaaataccctatataatcattatatcacccctttaaataccGGTATTAATTAAGTATACTGTAATGTGTAAGTATCGATCAGGAGCCATGGTAAAACGCTGCAGCTTTACAGTGAATGGACCAAGCTAATGATAGGAGACTGGCCGGTCTGTTTGAGGGCCCTGATAGCTCATGGGGCAGAACATGGTGCAAGCATAAACATAGTCTCTGTATGCATGGGTGTTTCAAATGCAGTTGAGTTGATGGGTTTATTTAAATTCACCACTTAGATCAACTGTGCACCTCAGTGCAGTATATTCTTATCAGTCCTAGCTGTTAGTTCTGTAAGTAAGTGTGTGTCAGTATGAACAGAAAACCATACAGTATGAGCAGTGAGAACTAACAGCTTTCACTGTTTCAGTTCTCGTCATCCTGACCATGGacgtgctcagtgctgtagtctacgtgatacgccgTAAACCCACTAGGAAAGGACAAGTGgatggtgatggcgcagtggatatgacacctgcctttggtgtgggagacctgggtttgattcctactgcgatacatcaaccaatgtgtccctgagcaagacacttaacccctacttgctccagaggcgtgcgacctctgacatatatagcaattgtaagttgctttggatataagtgtcagctaaatgtaatgtaacaagGATTTCCCTATACCCACTTACAAAAGCGCGAGAATAACATTACGTTACGACAATTGTTTTGTGACATAACTTCACACTTTCGTTCATAAATTCCCCCCATCTGTGTTGCAAGTCACTTCGGAACAACATAGTTGCTTGGCGGTATTTCTCTGCGCAACCCTAAAGGACATATGAAACAAAACTTAATTTAAACTACACTCTTTCAGTGTTTTGGTAAGCCTGCCCCTGCACCTACTGCAGACGTTAATGTTACAGAaactacagaaaatgagccaaatgAGGCTGATGCTATACGCGGTAACGTTACAAAAAACTTATGGGGTTGTCGCTTTGTgactagactacaccactggacgTGCTATACAGTAGGTTGCTTACATTTGTTACTTGCTGTGCCGTCCCAAGCGTTGCCACTGCGGCTAAAATATAGAGTTGTTGTGATCCTGCTTGGTAGCAGGACCCACCATGGCTGTGAGCCATTCAGACTTCAGTTGAAGAATAGACTTTTAGTCTTTAGACATGAACTCTTACCCATGGCCAGTGCACATAAAGTAAGGGTTAATCCCAACTACGTGTCCATTGTCAGGAATAACTGGACGACAGAGGAGGCCAAATGTCGAAGTCCATTAATTCCTGACAAaagacacctcgaagggcattacaTTACAACATGGTCAATTGCCGCAATTTTTTTTTAGGACTGTTTATTTTAATGCATGTACAATCAAAATCTTAGATAGACTTAAACCTGGAACAGTCAttcccatcccataatgttcttatgcaatgcaaacatgTTTCAATGCTCCAGCAAATAGGAcggaccttagatacgactttcCATGCTTAGCAACGGGAGGTATTTCTATTCCGCTCAGCTCGTAGAACCCTTCAGCTAATGTTATGCTAGCAAGATTCAGAGTCAATGACGTGTATGGGTGGCAATcagtaaatgtaattttaacagtatttttaacaacaagacaagctagctatccagccatgtcattgtccccaaatcaATATAAAGATTTTCACGAACAAATGATCGGCCATTTGTACTGGCGGCCGCAGCCTGAAGTAGAGAGCTGAACAGCGAACTGGATGAGAGATggtcgctgtgaaacaaagtcagttcaGAGTTTATTTTTACGGTCTATGGTTCAGAGGGGCGGTGCAACTTACTTTTACAGCAtgtgtgttagcgccatcctgtggtttTTGGTGTTGGTTTCAGAATTGAAAGCGTTATTAGCAATGAgtacactctaagaaatatctGTGTTTTAGCAGTTGTatgactgtatattttaacagaaattgtTTAGTAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35243 True 2255 lncRNA 0.42 1 9606743 9608997

Neighbor

gene id symbol gene type direction distance location
LOC120556464 NA coding upstream 310026 9261211 ~ 9296717 (+)
abhd17c abhd17c,LOC102793890,LOC100694079 coding upstream 515233 9056333 ~ 9091510 (+)
mesd mesdc2 coding upstream 855863 8745162 ~ 8750880 (+)
stard5 stard5 coding upstream 985031 8604276 ~ 8621712 (+)
LOC120556467 tmc3 coding upstream 1005065 8545261 ~ 8601678 (+)
lins1 NA coding downstream 23010 9632007 ~ 9642958 (+)
lrrk1 lrrk1 coding downstream 252155 9861152 ~ 10096639 (+)
LOC120555943 LOC103372586 coding downstream 816166 10425163 ~ 10465554 (+)
LOC120555947 hnrnpab,LOC100707314,LOC102779500,LOC101480042 coding downstream 875466 10484463 ~ 10485311 (+)
LOC120555948 LOC103462314 coding downstream 918841 10527838 ~ 10609081 (+)
G26335 NA non-coding upstream 133643 9460917 ~ 9473100 (+)
G26297 NA non-coding upstream 306536 9299488 ~ 9300207 (+)
G26276 NA non-coding upstream 362290 9240665 ~ 9244453 (+)
G26273 NA non-coding upstream 368178 9236352 ~ 9238565 (+)
G26218 NA non-coding upstream 785759 8820753 ~ 8820984 (+)
G26367 NA non-coding downstream 113226 9722223 ~ 9722683 (+)
G26368 NA non-coding downstream 118195 9727192 ~ 9727740 (+)
G26386 NA non-coding downstream 137140 9746137 ~ 9791753 (+)
G26391 NA non-coding downstream 184972 9793969 ~ 9794192 (+)
G26453 NA non-coding downstream 488302 10097299 ~ 10099084 (+)
adamts17 adamts17 other upstream 2281 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 228132 9333229 ~ 9378611 (+)
G26236 NA other upstream 451400 9068729 ~ 9155343 (+)
G26205 NA other upstream 846442 8753701 ~ 8760301 (+)
LOC120556365 LOC102793592,LOC103366350,LOC101487888,LOC102307622,LOC100694289 other upstream 2601065 6993956 ~ 7005678 (+)
asb7 asb7,LOC102792420 other downstream 44581 9653578 ~ 9677027 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other downstream 205700 9814697 ~ 9860000 (+)
lto1 oraov1 other downstream 2294275 11903272 ~ 11912722 (+)
G27086 NA other downstream 3500760 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 3626238 13235235 ~ 13237819 (+)

Expression


Co-expression Network