Gene
RNA
| Item | Value |
|---|---|
| gene id | G26477 |
| gene name | selenos |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 10233464 ~ 10241250 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| selenos | Predicted to be involved in endoplasmic reticulum unfolded protein response; retrograde protein transport, ER to cytosol; and ubiquitin-dependent ERAD pathway. Predicted to act upstream of or within intracellular protein transport. Predicted to be located in cytoplasmic microtubule. Predicted to be part of Derlin-1 retrotranslocation complex and Derlin-1-VIMP complex. Predicted to be integral component of endoplasmic reticulum membrane. Orthologous to human SELENOS (selenoprotein S). |
| description |
|---|
| PREDICTED: selenoprotein S |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU35405 | True | 1258 | lncRNA | 0.44 | 6 | 10233464 | 10241250 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrrk1 | lrrk1 | coding | upstream | 136825 | 9861152 ~ 10096639 (+) |
| lins1 | NA | coding | upstream | 590506 | 9632007 ~ 9642958 (+) |
| LOC120556464 | NA | coding | upstream | 936747 | 9261211 ~ 9296717 (+) |
| abhd17c | abhd17c,LOC102793890,LOC100694079 | coding | upstream | 1141954 | 9056333 ~ 9091510 (+) |
| mesd | mesdc2 | coding | upstream | 1482584 | 8745162 ~ 8750880 (+) |
| LOC120555943 | LOC103372586 | coding | downstream | 183913 | 10425163 ~ 10465554 (+) |
| LOC120555947 | hnrnpab,LOC100707314,LOC102779500,LOC101480042 | coding | downstream | 243213 | 10484463 ~ 10485311 (+) |
| LOC120555948 | LOC103462314 | coding | downstream | 286588 | 10527838 ~ 10609081 (+) |
| LOC120555949 | NA | coding | downstream | 500460 | 10741710 ~ 10745326 (+) |
| shcbp1 | shcbp1,LOC104947898,LOC104967817 | coding | downstream | 548595 | 10789845 ~ 10840149 (+) |
| G26464 | NA | non-coding | upstream | 108702 | 10124533 ~ 10124762 (+) |
| G26460 | NA | non-coding | upstream | 111127 | 10121929 ~ 10122337 (+) |
| G26458 | NA | non-coding | upstream | 112612 | 10120601 ~ 10120852 (+) |
| G26457 | NA | non-coding | upstream | 115117 | 10118086 ~ 10118347 (+) |
| G26456 | NA | non-coding | upstream | 119277 | 10113913 ~ 10114187 (+) |
| G26494 | NA | non-coding | downstream | 17822 | 10259072 ~ 10275437 (+) |
| G26504 | NA | non-coding | downstream | 52525 | 10293775 ~ 10294128 (+) |
| G26505 | NA | non-coding | downstream | 68424 | 10309674 ~ 10310003 (+) |
| G26508 | NA | non-coding | downstream | 89441 | 10330691 ~ 10336382 (+) |
| G26512 | NA | non-coding | downstream | 143980 | 10385230 ~ 10385641 (+) |
| aldh1a3 | aldh1a3,LOC106562593,LOC103357544,LOC104941118 | other | upstream | 373464 | 9814697 ~ 9860000 (+) |
| asb7 | asb7,LOC102792420 | other | upstream | 556437 | 9653578 ~ 9677027 (+) |
| adamts17 | adamts17 | other | upstream | 629002 | 9391108 ~ 9604462 (+) |
| cers3a | cers3,LOC102798777 | other | upstream | 854853 | 9333229 ~ 9378611 (+) |
| G26236 | NA | other | upstream | 1078121 | 9068729 ~ 9155343 (+) |
| lto1 | oraov1 | other | downstream | 1662022 | 11903272 ~ 11912722 (+) |
| G27086 | NA | other | downstream | 2868507 | 13109757 ~ 13110339 (+) |
| LOC120556202 | NA | other | downstream | 2993985 | 13235235 ~ 13237819 (+) |
| slc35c1 | slc35c1 | other | downstream | 3430227 | 13671477 ~ 13676613 (+) |
| lrrc4cb | LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 | other | downstream | 3568685 | 13809935 ~ 13856423 (+) |
