G26494


Basic Information

Item Value
gene id G26494
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 10259072 ~ 10275437 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35424
GATTGTTTCCACTTTTTAATCCATCTCTTGGGACTCCACCCAACTGTATGGAAGTGTGATACCCTTCTAAAACATAGGACATTAACAAGCAGACTATATAGGTGGACTGCAATTAGCTGAGAATGCCAACTGCTTAAAGAAATTGGTCCCACACAGCAATATAAGAAATCAGTTTAATGTATGTcgttatacaaaataaaacagcccTGGTAAGATGTATGTCCAACACAAGAAATctacacagaaaatacaaaaaaacaacaacttattTCCAGGAACTCAGGAGCCATTAACTTGTGGCTCTTCATCCATgtcttcttcatcctcctcctggTCACCCTCATTCATCTCTTCTCCAGGACCTCCACCCATATGTGACTCCATCTGTGCAGTGtcgtcctcttcttcttcctcctctaccATATCAGCTGGACCTTGTCTCAGATCTCGTCCTGGGATCTGACCAGCCTGCAGCATCCCTTTCAACCTCTCCACCTCTGCCAACGATGAAGCATTAGCGATAGCATTCTTGATGGCTTCCACGTCTGCTTGAGATGGCCCTGTCCTCTTTTTCTCAAGCTGTGCTGCCACTCCAGGAGTGAATGTTTTTGTTCGCCTGGCAATATCCTTTGCAAGCTGAGCACCTCGTTTGCCCTTGAACATTTTCTCTGCTTCCTGGCGTTCCTTGAGCTTTACCTTCTGGAAGTCAAGCACACGGATCTGTGGGATTTTGTTGATGACATAGAGCCTGTAATGCTTCTTGTTTGTCACTGGATTCCTTAACAAGCTGGAGATTCAGTGATTATTACAAACATGCATGATTATAATTCCGCAGTGCGAACAAATTACCTTTGAGTAGGGCTGTAACGATACACCAAACCCACAGGGGTGttggaaggaagaaaaaaaagattttgagaagaaaaaatatatttttattaaataacatttgaaaaacctGTATAAACTGAACACCAAAGAACAATATTAAAGCTGCAAGTAGCATTGGATGGGCACTCGCGCCTCTGTGCGCATCAGGGTTACTGGCAGACGCCGCTcgttgcgaccgtgcatttgcgcggcactccgACACtacaaatcgtcaccaatgaaaagggaactccctgctgagttcaatgatccCTCACTCAAGACTCTTcatcatacagttcattagttgtaaaagggggcgtggccaaatCATAGggagcgggccaaaccatcaccaatgaagaagg
>TU35425
GATTGTTTCCACTTTTTAATCCATCTCTTGGGACTCCACCCAACTGTATGGAAGTGTGATACCCTTCTAAAACATAGGACATTAACAAGCAGACTATATAGGTGGACTGCAATTAGCTGAGAATGCCAACTGCTTAAAGAAATTGGTCCCACACAGCAATATAAGAAATCAGTTTAATGTATGTcgttatacaaaataaaacagcccTGGTAAGATGTATGTCCAACACAAGAAATctacacagaaaatacaaaaaaacaacaacttattTCCAGGAACTCAGGAGCCATTAACTTGTGGCTCTTCATCCATgtcttcttcatcctcctcctggTCACCCTCATTCATCTCTTCTCCAGGACCTCCACCCATATGTGACTCCATCTGTGCAGTGtcgtcctcttcttcttcctcctctaccATATCAGCTGGACCTTGTCTCAGATCTCGTCCTGGGATCTGACCAGCCTGCAGCATCCCTTTCAACCTCTCCACCTCTGCCAACGATGAAGCATTAGCGATAGCATTCTGAAATACAAACGCACAATCTCTAAGCTAACATGGTCTGTTGAATTATTGAAGATTTTCAGAGATCAATTTTCATTCAGCAGGCTAAAGATCTGAATCTTCATCCAGGTTATTTTAATACATCAGTGGTGCTTAATCTCCAAAGTGGTTGCATTAACATTACTTCGAGTTGATTATATCACAGCATATGCCAATAGGAACATGCTTCAAAAGGCACATTTTAACCAACATATCAGGAATGAAAAACGACAAATTTTAAAGTTATGCATAAGTGTGCATTCTTTAAACttaaaaaccaaaccaaaatatGCATTCAGTCAAGGTTCACCACAGGCTTTTTCTTTCAACCTCATCtcaatttaatttttattttaaaatcagtgGGTGGAGTCATTAGGGGCCCGGTATTTCAAAACTGGATCAGAATGATCTGGAAAATGAAATCTCCCTTTTCTCAGTAACTTTGTCCCAGTATTTTAAAACATTGGCAAGTTGGATCATGGTGATCCAGATATGACCAGATAGGGATTTCCAGAACTCGAGTCCCAGCTCCTGGATCGGAACAGAAAAGCAAAGGCCAGACTATTTTATGTAAGGTGCAAGTGGTAGCAAAGCTTTCTCGTCCAAATCTACAAAGTATACCTTTGTATAATGTATAGCATTAGTAAGACTATACCAATGGCAACCAATCATGTCTCACCTACTAAAAACGAGGGTGTTCGCTAATTAAGCCTAGGTCATGCAAACAGCAACAAACTTCACTGTGCTGACTTCTAGGTTAGGTAGCTAGCAGGTTAGCCAGCTAGCGGGCTTTGTTGATGTATGTTACGGTCTATGGTTCaaccttaaagggatacttcaccgatttagcattcagctttgtatcagtagaaacccgatagtatttctgaatgaacgtgcttccctccctcatgtccccctgagacgagagatctctgcatttggggcctggaaaaaaatcttccgatgacttAAAATggcgatttttgcgtcatcggaagatttttgggccagaggcaaggactacagccagttagtaggatctacttccgcatgttttcaacacgcccacagggggttggactgccgagtctggcagAGAtcttccgaatgaaaacgactgtcagccatcttgaagcttcgctaaacaggctctcggttttcagcagaaaacatttacaacaattatctgcattcaaactaccggacgtgtgtaccaccgggatacatcagtacagatcggagaatatgcaggaaacgttattacagatggaatactcggcacactacgtgagattcgcctgcacggagaccagcggtgtcgctcaatgccgctagccggctaggggacatcctcatcggctaggtggaaagctaacgctagctgttcacctgtcccatccatcctgcttgcaagtgtctgctcattaaacaacaagctggactacatcctccttcaacgaaactcccaacctGAGTTCAGAGAcggctgtgtttttgtttttgtggaaacatgcctgaacaacagtgtaccggcaccgggactatccagctaccaggctgctcttgccggcccgtggaggtgggctgtgttaaactgactggtgtagaaataaaatccaactagctactgcttactgctggtggagcttgtgactgttaaatgccgaccattcgacattccacgctaattcacggctgtgtttagctacaccaatgctagtatgcgttagctgaactttacggatcctgcttgcaagtgtccgctcatttagaccacaaactggactacatccaacttcaacgaaactcccaacgtgagttcagagactgctgtgtttttgttgttgtggaaacatgcctgaatagtgtaccggactgtccagctaccaggcctgctagccctccgagctagagatgctctgtcgccgggtaaaagaggtgggctgcgTTAACACAgtgtggtgcagaaatgtggtgatttgtatccatttaactgctaactgctggtggagtttgactgttaaatgccgaccattctacattgcacgctaattctcggctgtgtttatgctcggtgtttacagcccaccaagtgctaatgctagtatgtgttagctgaactttacggagcctataaagtgtgtgtactaaatgtacaGGGCTCGACACAAGCAacggcccgatggcccggggccagtaaaaacgtatgtcgggctggttgatTGGCCAGTCACTGGCCCGCACGGGCCAGTACCAACGTCATACAGAGTGGCACGAAGCGTgtaaatgttaacatttcacattttcacctcaggtaatttataaacaattcatttggatacaagTGTTGCATTTTGGAAGATAGATTGGATTCAGAACAGCGATGTCCGcgctgcgcgcacacacacagcagggccGAGGTGTGTGcgttcacgcagcacatgtaactgaatggaaacgttaccgaggattatttaccgccgatggcgcagatgaactaacgttacactcgttactgtaagtagcctagcctacaataaaacctccatgattaaagagtcaatacttatcaataacccacctaCCTGTTGTACAGGCATAatcatgtagaaagcgatatttcagtctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35424 False 1238 lncRNA 0.44 5 10259072 10275437
TU35425 True 3181 lncRNA 0.44 2 10259072 10262584

Neighbor

gene id symbol gene type direction distance location
lrrk1 lrrk1 coding upstream 162433 9861152 ~ 10096639 (+)
lins1 NA coding upstream 616114 9632007 ~ 9642958 (+)
LOC120556464 NA coding upstream 962355 9261211 ~ 9296717 (+)
abhd17c abhd17c,LOC102793890,LOC100694079 coding upstream 1167562 9056333 ~ 9091510 (+)
mesd mesdc2 coding upstream 1508192 8745162 ~ 8750880 (+)
LOC120555943 LOC103372586 coding downstream 149726 10425163 ~ 10465554 (+)
LOC120555947 hnrnpab,LOC100707314,LOC102779500,LOC101480042 coding downstream 209026 10484463 ~ 10485311 (+)
LOC120555948 LOC103462314 coding downstream 252401 10527838 ~ 10609081 (+)
LOC120555949 NA coding downstream 466273 10741710 ~ 10745326 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding downstream 514408 10789845 ~ 10840149 (+)
G26477 selenos non-coding upstream 17822 10233464 ~ 10241250 (+)
G26464 NA non-coding upstream 134310 10124533 ~ 10124762 (+)
G26460 NA non-coding upstream 136735 10121929 ~ 10122337 (+)
G26458 NA non-coding upstream 138220 10120601 ~ 10120852 (+)
G26457 NA non-coding upstream 140725 10118086 ~ 10118347 (+)
G26504 NA non-coding downstream 18338 10293775 ~ 10294128 (+)
G26505 NA non-coding downstream 34237 10309674 ~ 10310003 (+)
G26508 NA non-coding downstream 55254 10330691 ~ 10336382 (+)
G26512 NA non-coding downstream 109793 10385230 ~ 10385641 (+)
G26526 NA non-coding downstream 179964 10455401 ~ 10455612 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 399072 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 582045 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 654610 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 880461 9333229 ~ 9378611 (+)
G26236 NA other upstream 1103729 9068729 ~ 9155343 (+)
lto1 oraov1 other downstream 1627835 11903272 ~ 11912722 (+)
G27086 NA other downstream 2834320 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 2959798 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 3396040 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 3534498 13809935 ~ 13856423 (+)

Expression


Co-expression Network