LOC120556222


Basic Information

Item Value
gene id LOC120556222
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 10390976 ~ 10402234 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35461
CACATACCACTAAGGAGAACTGAAAAATTGTTGTTCACTGATATCTCCTTTCATTCTCAGGAGCATTACTATGATCCAGTCTCTCACTGTGGATTCCTAGAGACTAAACTGCACAACCTTAGACGCAATCTCGAGCAAAAGCAGAGGCATTATAGGAAGCGAAAAGTGACCAATGACTGCACTGGACCCGAGAAGCCTGATACAACAGAGGATGGGCATGCCAGCAGCACAAATGAGTGAGCCACCTTGATTCAACGGTTGCGGCCCTCAGCTGAGAACCTTTCAGCGATCAAGTCAGGCATGGAGAAAACGTACACATGTCGCAGATCCTGGATTACTAAGGACTCCCCCactttaaacgtacaatatgtaactttctgccactaggggtctctcaaccaaaacaatggacggtaaaactggacttttgatgacgttgggaagttgcgtggaattatgggagttttaagtgttaaacaccttcgctgccagttagaatgcatcagttcacggacgagtttacccgttcaagtttattcacgttacgtttattcattctaataaaatagctgcagtttccccaacataattacgtttttcttgattagatttttatttgtagctgaccagttagctcgtgagccagcaagctaacagtagccagcagctaaaacacaaaatatttcacatatcagtgtcaccttttggatcgtttcaacaccggggcggacggggtttgttgtaacgctagctagctactaaacgaggctgagagacaggtagagagggagggagaaggagggatggagagaggacagagagagaaaagagagagaaacagggagagagagagaaagaaaagagaaac
>XR_005638828.1
TAACATGGAAGAACCCAGTCAGCCCCTTCAGAAGAAAGCCCCACAGATTCTTACAGAGTATGAGACTACAGGTATCCTGGCAGTGCCATCGAGGAAGCTCCTTGTGAAGACGTGCATAGGAGATTTGGTGGAGAGGTGTGGTTTTTACCCTCTTAGTGCAGAGAAGCATCATCACCACCTTCCCATCCCTGAGTGTCAGAGCAGAAGGACAAGGGGAAGGATTTGAGCATTACTATGATCCAGTCTCTCACTGTGGATTCCTAGAGACTAAACTGCACAACCTTAGACGCAATCTCGAGCAAAAGCAGAGGCATTATAGGAAGCGAAAAGTGACCAATGACTGCACTGGACCCGAGAAGCCTGATACAACAGAGGATGGGCATGCCAGCAGCACAAATGAGTGAGCCACCTTGATTCAACGGTTGCGGCCCTCAGCTGAGAACCTTTCAGCGATCAAGTCAGGCATGGAGAAAACGTACACATGTCGCAGATCCTGGATTACTAAGGACTCCCCCactttaaacgtacaatatgtaactttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35461 True 868 lncRNA 0.45 2 10390976 10395296
XR_005638828.1 False 542 lncRNA 0.49 3 10394919 10402234

Neighbor

gene id symbol gene type direction distance location
snrpa1 snrpa1 coding downstream 98052 10259231 ~ 10292924 (-)
zgc:113274 NA coding downstream 145590 10244124 ~ 10245386 (-)
selenos NA coding downstream 149749 10233464 ~ 10241227 (-)
chsy1 chsy1 coding downstream 159254 10127978 ~ 10231722 (-)
fah fah coding downstream 1065688 9308597 ~ 9325288 (-)
ano9b ano9,LOC103369658,LOC100691858,LOC102197938 coding upstream 238704 10640938 ~ 10731901 (-)
LOC120555515 NA coding upstream 343627 10745861 ~ 10750166 (-)
tssc4 NA coding upstream 363939 10766173 ~ 10789770 (-)
LOC120555500 LOC107373152,LOC106943100,LOC106904307 coding upstream 805306 11207540 ~ 11220942 (-)
LOC120556010 tollip coding upstream 843518 11245752 ~ 11291530 (-)
G26515 NA non-coding downstream 3775 10386928 ~ 10387201 (-)
G26510 NA non-coding downstream 25800 10364820 ~ 10365176 (-)
G26507 NA non-coding downstream 73850 10316748 ~ 10317126 (-)
G26506 NA non-coding downstream 74897 10315568 ~ 10316079 (-)
G26467 NA non-coding downstream 263786 10126830 ~ 10127190 (-)
G26525 NA non-coding upstream 16236 10418470 ~ 10418816 (-)
G26550 NA non-coding upstream 217196 10619430 ~ 10619641 (-)
G26551 NA non-coding upstream 217427 10619661 ~ 10619861 (-)
G26584 NA non-coding upstream 331117 10733351 ~ 10733863 (-)
G26585 NA non-coding upstream 332492 10734726 ~ 10734938 (-)
G26298 NA other downstream 1094230 9295068 ~ 9296746 (-)
LOC120555589 cemip other downstream 1411832 8759601 ~ 8979144 (-)
tlnrd1 mesdc1 other downstream 1632168 8733419 ~ 8758808 (-)
il16 LOC102796330 other downstream 1693354 8630608 ~ 8697622 (-)
LOC120555934 NA other downstream 1894341 8494353 ~ 8496635 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other upstream 1074272 11476506 ~ 11510300 (-)
LOC120555651 NA other upstream 1240997 11643231 ~ 11669269 (-)
G26891 NA other upstream 1558467 11960701 ~ 11961772 (-)
G26924 LOC108281047 other upstream 1902305 12304539 ~ 12304824 (-)
G27075 LOC104939823,LOC100707594 other upstream 2667762 13069996 ~ 13095766 (-)

Expression


Co-expression Network