XLOC_005061 (MED9)


Basic Information

Item Value
gene id XLOC_005061
gene name MED9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 1403806 ~ 1406480 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009857
ATTTGATGATGAGTCGATTTAATACTTGAGTTACAAAAGACACCGAAATttagatataaatattattaatacactTCTATCGTGACGTCGTTAATATAGTGACGCAGACGCGCGTTGATGACGTGAGGTTCTCCGTGAAAACATGGCGGCTGCCGTACCGGTGGTGGAGGAGGCTGAAGATTATTCCTTTTTGCCAATTATTCACGACGTCATAAAATGCATGGATAAAGACAGTCCAGACGTCCATCAGGAGCTCAACAAGCTGAAGACGAAGATCCAGGAGGCCCGCGAGCAGATCTCCAGCATGCCAGGCATCGACATGAGTCCAGCGGTGCAGGAGAGCAAACTGCAAACGCTCCGAGAACAGGTCCAGACCAAGAACCAGCTCCTGCAGAAATACAAGAGCCTGTGCATGTTTGACATCCCTAAACCATCCTGATGTCCAGCATGAACCGGCAGAGTTTAATGTCATGACACTCTCTCACCAACGGGGGcgacactcactcactcacatctGCTGCATGGATTTGTTTTGTACATATCATTTGCTTTTTCTTTGGACAGTATTCAAATCAGTGTGTGCTTTTTGTATACTTTACATTTGTGCATTAAATTTATAAAACCACATATTTGATAAAAGTTCAGTTGCATTtaacacatgaaaaaaaatactagtgtttttgaagcatactacactgtcagaaataatCTGTCAATGTGGCATTTTTGTCtctaaaggtacatattaataacTAAAAAGTGCAAATGTGCATCTTAAAGATACAAAAGTAAACCTTTTTTGTAAATATCATTCACTTTTACTTTGGACATCACATTCGGACTTTTGCTTTgtgcattaaattaattaaagcacCTTTTAAATAGAGGTTGTTAGTTGCATTTTCATAGTGTTTTTCAGGCATACTTAGTCAAATGTATtataccagtggttcccaacctttttttttttg
>TCONS_00009858
ATGTGCTTCAGGCTTttttgaaacctgcaggtaagtgtgttggaactTAACTGTGCAGGGATGCAGAGTTTGACCCCCCTGGAATATTCATAGATGCATGGATAAAGACAGTCCAGACGTCCATCAGGAGCTCAACAAGCTGAAGACGAAGATCCAGGAGGCCCGCGAGCAGATCTCCAGCATGCCAGGCATCGACATGAGTCCAGCGGTGCAGGAGAGCAAACTGCAAACGCTCCGAGAACAGGTCCAGACCAAGAACCAGCTCCTGCAGAAATACAAGAGCCTGTGCATGTTTGACATCCCTAAACCATCCTGATGTCCAGCATGAACCGGCAGAGTTTAATGTCATGACACTCTCTCACCAACGGGGGcgacactcactcactcacatctGCTGCATGGATTTGTTTTGTACATATCATTTGCTTTTTCTTTGGACAGTATTCAAATCAGTGTGTGCTTTTTGTATACTTTACATTTGTGCATTAAATTTATAAAACCACATATTTGATAAAAGTTCAGTTGCATTtaacacatgaaaaaaaatactagtgtttttgaagcatactacactgtcagaaataatCTGTCAATGTGGCATTTTTGTCtctaaaggtacatattaataacTAAAAAGTGCAAATGTGCATCTTAAAGATACAAAAGTAAACCTTTTTTG

Function

symbol description
med9 Predicted to enable transcription coregulator activity. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex.

GO: NA

KEGG:

id description
ko03021 Transcription machinery

Ensembl:

ensembl_id ENSDARG00000096631

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009857 False 971 mRNA 0.39 2 1403806 1406480
TCONS_00009858 True 679 mRNA 0.42 2 1403975 1405228

Neighbor

gene id symbol gene type direction distance location
XLOC_005060 LO018020.2 coding downstream 33434 1368645 ~ 1370372 (-)
XLOC_005059 RASSF4 coding downstream 42289 1349418 ~ 1361517 (-)
XLOC_005058 si:dkey-275b16.2 coding downstream 58244 1338341 ~ 1345562 (-)
XLOC_005057 NA coding downstream 318579 1072485 ~ 1085227 (-)
XLOC_005056 polr3e coding downstream 369346 1014418 ~ 1034460 (-)
XLOC_005062 NA coding upstream 46420 1452900 ~ 1453339 (-)
XLOC_005063 CU694266.1 coding upstream 83992 1490472 ~ 1490588 (-)
XLOC_005064 sstr2a coding upstream 149667 1556147 ~ 1557286 (-)
XLOC_005065 CABZ01081830.2 coding upstream 286534 1693014 ~ 1694053 (-)
XLOC_005066 sox9a coding upstream 541113 1947593 ~ 1951284 (-)
XLOC_005043 NA non-coding downstream 995175 406187 ~ 408631 (-)
XLOC_005042 NA non-coding downstream 1048251 337808 ~ 355555 (-)
XLOC_005037 NA non-coding downstream 1124471 250081 ~ 279335 (-)
XLOC_005067 NA non-coding upstream 593539 2000019 ~ 2001490 (-)
XLOC_005068 NA non-coding upstream 594156 2000636 ~ 2001824 (-)
XLOC_005069 NA non-coding upstream 661483 2067963 ~ 2479931 (-)

Expression


Co-expression Network