G26974


Basic Information

Item Value
gene id G26974
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12564271 ~ 12564883 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35988
CTGAAAGTTAAATACTTACAAATGTAGGCACACATAGATCAGATCAATCACAGAAAAATACAGTACTTCATGTTAATTGCTGGCATCTAAAACAattggggccctattttaacgatgtaagcGCATggtgtgaagcgcctggtgcaggtgtgtttagggcgtgtccaaatccacttttgctagtttgacggcagtaaaaagggtctgtgtgccgggcgcctggtcctaaagggttgtacttagtgtcttcattaatcagaggtgtgttttgggcgtaacatgcaatcaaccaatcagagatcatctcccattcatcaaccaatcagagatcatctcccgttccctttaaaagccaggcgcgtttggaccttagCGCATtcctgttatgatggaggatttacaccataatatttttattagtaatcttctgcatgtgtgtgtgtgtgtgtgtgtgtgtgctgctgtgcgtccctgtgtgtgtaactttagactaggtttttgttggtcaatggcgcaatcacttcctgctgcctcaagatcccagaatacacctgaacacacctccctgtaagaccagctcAGCCAGAATGCATGTTCTTACAGGGATGCACTC

Function

GO:

id name namespace
GO:0035235 ionotropic glutamate receptor signaling pathway biological_process
GO:0007215 glutamate receptor signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35988 True 613 lncRNA 0.45 1 12564271 12564883

Neighbor

gene id symbol gene type direction distance location
vstm2b vstm2b coding downstream 71100 12489220 ~ 12493171 (-)
LOC120555959 NA coding downstream 385600 12157744 ~ 12178671 (-)
ccnd1 ccnd1 coding downstream 577344 11980178 ~ 11986927 (-)
fgf3 fgf3 coding downstream 767052 11794280 ~ 11797219 (-)
fgf4 fgf4,LOC104954779 coding downstream 779834 11780768 ~ 11784437 (-)
rasl12 NA coding upstream 623531 13188414 ~ 13198636 (-)
ubap1lb ubap1l,LOC107685210,LOC106932412,LOC103156499,LOC105938593 coding upstream 643446 13208329 ~ 13238252 (-)
pdcd7 NA coding upstream 675803 13240686 ~ 13248416 (-)
LOC120555522 NA coding upstream 720358 13285241 ~ 13294261 (-)
LOC120556590 NA coding upstream 724327 13289210 ~ 13289264 (-)
LOC120555517 NA non-coding downstream 205640 12356686 ~ 12358631 (-)
G26925 NA non-coding downstream 257391 12306659 ~ 12306880 (-)
G26923 NA non-coding downstream 280639 12283382 ~ 12283632 (-)
G26921 NA non-coding downstream 284858 12279149 ~ 12279413 (-)
LOC120556136 NA non-coding downstream 296351 12267143 ~ 12267920 (-)
G26982 NA non-coding upstream 40739 12605622 ~ 12606134 (-)
G26983 NA non-coding upstream 45214 12610097 ~ 12610432 (-)
LOC120556302 NA non-coding upstream 105638 12670521 ~ 12672689 (-)
G27001 NA non-coding upstream 111097 12675980 ~ 12676229 (-)
G27004 NA non-coding upstream 129779 12694662 ~ 12694922 (-)
G26924 LOC108281047 other downstream 259447 12304539 ~ 12304824 (-)
G26891 NA other downstream 602499 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 895002 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 1053971 11476506 ~ 11510300 (-)
G26298 NA other downstream 3267525 9295068 ~ 9296746 (-)
G27075 LOC104939823,LOC100707594 other upstream 505113 13069996 ~ 13095766 (-)
G27321 NA other upstream 1904875 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 2013144 14578027 ~ 14580011 (-)
G27420 NA other upstream 2277830 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 2485779 15050662 ~ 15078830 (-)

Expression


Co-expression Network