G26979 (LOC104961098)


Basic Information

Item Value
gene id G26979
gene name LOC104961098
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12598949 ~ 12599482 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35994
gggaacaccttgagtgactgtggctgtggcagaggtgtggttgtggagagagatgaaatgggatctgttggaaaggtaggagtggagccagctgagtgcagtaccgtcgataccgaggtctttgagtctggtgagcaggatgttatggctcacagtatcgaaggctgcactcaggtcgaggaggatgaggatgttgagggaaccggtgtcagcaaaggtgaggaggtcgttgaggactttgaggagagcggtttctgtgctgtgtagggggcgaaaaccagattggagaggttcgaataggttattggcaagaagatgggtttgtagttgtgaggcgactatgcgttccagggttttagacagaaaggggaggttggatattgggcggtagttgttgagagaggagggatccagaccaggttttttaaggattggggtgacagcggcagttttgaaagcagaggggacagttccaagggacagtgaggagttgaagaggttagtgaggtaggggcataggaccgggaggcagga

Function

NR:

description
PREDICTED: uncharacterized protein LOC104961098

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35994 True 534 lncRNA 0.53 1 12598949 12599482

Neighbor

gene id symbol gene type direction distance location
LOC120555527 NA coding upstream 36396 12556047 ~ 12562553 (+)
LOC120556595 NA coding upstream 567221 12031621 ~ 12031728 (+)
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 1460551 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 1467477 11129921 ~ 11131472 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding upstream 1758800 10789845 ~ 10840149 (+)
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding downstream 466470 13065952 ~ 13071332 (+)
LOC120556474 NA coding downstream 490053 13089535 ~ 13091435 (+)
si:cabz01068815.1 NA coding downstream 545025 13144507 ~ 13176403 (+)
kbtbd13 NA coding downstream 605357 13204839 ~ 13208335 (+)
spg21 spg21,LOC102788283 coding downstream 652683 13252165 ~ 13271218 (+)
LOC120556106 NA non-coding upstream 6320 12587166 ~ 12592629 (+)
G26975 NA non-coding upstream 28438 12570231 ~ 12570511 (+)
G26967 NA non-coding upstream 35724 12562808 ~ 12563225 (+)
LOC120556331 NA non-coding upstream 102787 12495645 ~ 12496162 (+)
G26939 NA non-coding upstream 218297 12380329 ~ 12380652 (+)
G26980 NA non-coding downstream 159 12599641 ~ 12600287 (+)
G26984 NA non-coding downstream 39250 12638732 ~ 12638986 (+)
G26994 NA non-coding downstream 69394 12668876 ~ 12669301 (+)
G26998 NA non-coding downstream 73294 12672776 ~ 12674123 (+)
G27012 NA non-coding downstream 202981 12802463 ~ 12802680 (+)
lto1 oraov1 other upstream 686227 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 2738949 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 2921922 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 2994487 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 3220338 9333229 ~ 9378611 (+)
G27086 NA other downstream 510275 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 635753 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 1071995 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 1210453 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 2109080 14708562 ~ 14735176 (+)

Expression


Co-expression Network