G26980


Basic Information

Item Value
gene id G26980
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12599641 ~ 12600287 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU35998
aggtaggtgctggagtagatcctggaaggtcagatacaggggatagggatttgtaaatgagattgattttgtcagtgaaaaagtggaggaatgagttgcagagatccggagtagaggtaaggaggctgttggtccgaggcttgatgaggttgttcaatgtggagaagagggttctggggttttggcaggggtcggtgaggatggtggagaggtaggcagatttggcagcaatgagggcatctttgtaggcgatgagatgggatttataggcttcatgatggactgtgagggatgatttctttgtcagacgttcaagttggcggccagtttgtttcatttttcggagtgcaggtgtgtaccagggtgaagaggtgttaaaagtgacgagttttgttttgaggggggccaggatgttgagggaggtagacaaggtggagttgaggtggtctgtgaggtcatcgggtgaggtgagggttgagtccaggtggagagtggtggagagcaggtcagagagatggtggggattgatagatttgaggttgcggaaggtgatttctctgaggaggcgggggcgtggggttggagaagggatggtgaaccgtatcagtttgtgatcagagaggggaaagaggcatggatggaggtcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35998 True 647 lncRNA 0.51 1 12599641 12600287

Neighbor

gene id symbol gene type direction distance location
LOC120555527 NA coding upstream 37088 12556047 ~ 12562553 (+)
LOC120556595 NA coding upstream 567913 12031621 ~ 12031728 (+)
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 1461243 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 1468169 11129921 ~ 11131472 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding upstream 1759492 10789845 ~ 10840149 (+)
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding downstream 465665 13065952 ~ 13071332 (+)
LOC120556474 NA coding downstream 489248 13089535 ~ 13091435 (+)
si:cabz01068815.1 NA coding downstream 544220 13144507 ~ 13176403 (+)
kbtbd13 NA coding downstream 604552 13204839 ~ 13208335 (+)
spg21 spg21,LOC102788283 coding downstream 651878 13252165 ~ 13271218 (+)
G26979 LOC104961098 non-coding upstream 159 12598949 ~ 12599482 (+)
LOC120556106 NA non-coding upstream 7012 12587166 ~ 12592629 (+)
G26975 NA non-coding upstream 29130 12570231 ~ 12570511 (+)
G26967 NA non-coding upstream 36416 12562808 ~ 12563225 (+)
LOC120556331 NA non-coding upstream 103479 12495645 ~ 12496162 (+)
G26984 NA non-coding downstream 38445 12638732 ~ 12638986 (+)
G26994 NA non-coding downstream 68589 12668876 ~ 12669301 (+)
G26998 NA non-coding downstream 72489 12672776 ~ 12674123 (+)
G27012 NA non-coding downstream 202176 12802463 ~ 12802680 (+)
G27016 NA non-coding downstream 226105 12826392 ~ 12826634 (+)
lto1 oraov1 other upstream 686919 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 2739641 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 2922614 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 2995179 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 3221030 9333229 ~ 9378611 (+)
G27086 NA other downstream 509470 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 634948 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 1071190 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 1209648 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 2108275 14708562 ~ 14735176 (+)

Expression


Co-expression Network