G26994



Basic Information


Item Value
gene id G26994
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12668876 ~ 12669301 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU36012
gcactacaggatttaccctattatagcctactttatcgacaggaatactgtagataggtcaaacagcaaacagccagccacaaatagtctataaacaaagcatcaggctgtctttgagatttcatatgaacaacggttaaagttactcaggctaccgaagaataccataattcctccattcaattagaccttagcgacgcaccccaagcttccatccttagcaaacagccatgtatatgggctcttTCAGTCTCTCCAcggctggctgttccaatttaacgggagagagaggagcaagaggggttaggatcatcttcagccagagaggacattatttcttcagcttcttcttgcgttgtcaccccagTGGCAAATGTGCCAACAGGGCTTGcaacaggtgaattagtcgtgctattaacatcatcg

Function


GO: NA

KEGG:

id description
ko03030 DNA replication
ko03420 Nucleotide excision repair
ko04110 Cell cycle

RNA


RNA id representative length rna type GC content exon number start site end site
TU36012 True 426 lncRNA 0.45 1 12668876 12669301

Neighbor


gene id symbol gene type direction distance location
LOC120555527 NA coding upstream 106323 12556047 ~ 12562553 (+)
LOC120556595 NA coding upstream 637148 12031621 ~ 12031728 (+)
minar1 kiaa1024,LOC107562943,LOC102799073 coding upstream 1530478 10934633 ~ 11138398 (+)
LOC120555826 NA coding upstream 1537404 11129921 ~ 11131472 (+)
shcbp1 shcbp1,LOC104947898,LOC104967817 coding upstream 1828727 10789845 ~ 10840149 (+)
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding downstream 396651 13065952 ~ 13071332 (+)
LOC120556474 NA coding downstream 420234 13089535 ~ 13091435 (+)
si:cabz01068815.1 NA coding downstream 475206 13144507 ~ 13176403 (+)
kbtbd13 NA coding downstream 535538 13204839 ~ 13208335 (+)
spg21 spg21,LOC102788283 coding downstream 582864 13252165 ~ 13271218 (+)
G26984 NA non-coding upstream 29890 12638732 ~ 12638986 (+)
G26980 NA non-coding upstream 68589 12599641 ~ 12600287 (+)
G26979 LOC104961098 non-coding upstream 69394 12598949 ~ 12599482 (+)
LOC120556106 NA non-coding upstream 76247 12587166 ~ 12592629 (+)
G26975 NA non-coding upstream 98365 12570231 ~ 12570511 (+)
G26998 NA non-coding downstream 3475 12672776 ~ 12674123 (+)
G27012 NA non-coding downstream 133162 12802463 ~ 12802680 (+)
G27016 NA non-coding downstream 157091 12826392 ~ 12826634 (+)
G27023 NA non-coding downstream 201343 12870644 ~ 12870871 (+)
G27028 NA non-coding downstream 229674 12898975 ~ 12899187 (+)
lto1 oraov1 other upstream 756154 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 2808876 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 2991849 9653578 ~ 9677027 (+)
adamts17 adamts17 other upstream 3064414 9391108 ~ 9604462 (+)
cers3a cers3,LOC102798777 other upstream 3290265 9333229 ~ 9378611 (+)
G27086 NA other downstream 440456 13109757 ~ 13110339 (+)
LOC120556202 NA other downstream 565934 13235235 ~ 13237819 (+)
slc35c1 slc35c1 other downstream 1002176 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 1140634 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 2039261 14708562 ~ 14735176 (+)

Expression



Co-expression Network