G27001


Basic Information

Item Value
gene id G27001
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 12675980 ~ 12676229 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36019
GGGGAGGTGAGAGCAGAGTAGGcgctgagaaagagagagggagagagagagagagagagagaggcaggcaaaCAGGACAacacaggagaggagaaaaCCAACCGAGAAATGAACCAAAGAAtagtaaacaaaacagaaaactcacagccagccgaccccaaccatcacaTCTTGCGTTCTGGATAGTGCGCACCACGGCAGGAGGCAAGCCTAATTTCTGCAAACGTTCCCGCTCAGCAGCCAGCCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36019 True 250 lncRNA 0.53 1 12675980 12676229

Neighbor

gene id symbol gene type direction distance location
vstm2b vstm2b coding downstream 182809 12489220 ~ 12493171 (-)
LOC120555959 NA coding downstream 497309 12157744 ~ 12178671 (-)
ccnd1 ccnd1 coding downstream 689053 11980178 ~ 11986927 (-)
fgf3 fgf3 coding downstream 878761 11794280 ~ 11797219 (-)
fgf4 fgf4,LOC104954779 coding downstream 891543 11780768 ~ 11784437 (-)
rasl12 NA coding upstream 512185 13188414 ~ 13198636 (-)
ubap1lb ubap1l,LOC107685210,LOC106932412,LOC103156499,LOC105938593 coding upstream 532100 13208329 ~ 13238252 (-)
pdcd7 NA coding upstream 564457 13240686 ~ 13248416 (-)
LOC120555522 NA coding upstream 609012 13285241 ~ 13294261 (-)
LOC120556590 NA coding upstream 612981 13289210 ~ 13289264 (-)
LOC120556302 NA non-coding downstream 3291 12670521 ~ 12672689 (-)
G26983 NA non-coding downstream 65548 12610097 ~ 12610432 (-)
G26982 NA non-coding downstream 69846 12605622 ~ 12606134 (-)
G26974 NA non-coding downstream 111097 12564271 ~ 12564883 (-)
LOC120555517 NA non-coding downstream 317349 12356686 ~ 12358631 (-)
G27004 NA non-coding upstream 18433 12694662 ~ 12694922 (-)
G27011 NA non-coding upstream 90412 12766641 ~ 12766842 (-)
G27024 NA non-coding upstream 194402 12870631 ~ 12870928 (-)
G27026 NA non-coding upstream 209623 12885852 ~ 12891293 (-)
LOC120556265 LOC108249937,LOC106912228 non-coding upstream 308080 12984309 ~ 12986418 (-)
G26924 LOC108281047 other downstream 371156 12304539 ~ 12304824 (-)
G26891 NA other downstream 714208 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 1006711 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 1165680 11476506 ~ 11510300 (-)
G26298 NA other downstream 3379234 9295068 ~ 9296746 (-)
G27075 LOC104939823,LOC100707594 other upstream 393767 13069996 ~ 13095766 (-)
G27321 NA other upstream 1793529 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 1901798 14578027 ~ 14580011 (-)
G27420 NA other upstream 2166484 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 2374433 15050662 ~ 15078830 (-)

Expression


Co-expression Network