G27129


Basic Information

Item Value
gene id G27129
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13246700 ~ 13248009 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36156
cttcttcctttcctccACTAGGCGGATCTGCTGCATCCTCCATGTGTTTATGGCAGCCTCTTTGTCCGCGATGCGCTCCTCTCTCTGGGTCTGCTCCAGCTGGAGCTCCCTCCTGGCTCTCCGGAGCCGGGCCCTCCTCTTAGCAACACGGCATACTTTAGTTTTCCAACTCTCTAAACACTCACTGGCACCGAGGACTGCCAGTCTGTCCTGTAGCTCTCTCTTCACCTGTAAAGCCTTTAAATAAGAGTTGGCCCAAACACACTCATTCTCCACGTTGTTCCTCAGAATTTCACAGGACTCTGCCAGCTGGGAGACAATGTGAGCTGCCCCGTACAGAGCCGCTCTCAGCTCCGGGGCAGAGCTGCACGGAGCCGCTCTCTGCTCCGGGGCAGAGCTGCACGGAGCCGCTCTCAGCTCCGGGGCAGAGCTGTGTGGCGTCTTGTGCCGGGCCTGTAGGCTCTTGGAGTTTTGTTCTCTATCTTGTAGAAAGCGTCCGAGCCACTGTTGATCCTGCCTCCTCTGAAGGACCGTTTCATCCTCAGGAATCCGGTCATCTTTACCCTGCGGAGGAAACCGAGCTCCACTCGCAGAGAAATCCTCATACTGGTGCTGTTGTTTCTGACTACAGTCCGGGGCATAGCCTGTAGACTGAGGACAGGGTCTAAGCTGCTGGGGAAACGCTCCCCTGCTGCTGTATATGTTTACCGGTGCGCTGGGAACCATGTTAGGGAAGTGTCCGGGCGGCGGACAGCCGAAAGGAGGCGGGGGGACGGAGGGGTCAAATCCATACGGAAGGGCTAAGCCGGGCCCTCCGAAACTTCCTCCTCCGGGAGACTGTGCTGGAAAATCGCACCTAAACCCATACGGGTGAGCGTCATACCCCTGGGAAGGAGTCCACGGTGGAGCAGTGTGGCCCGGCTGAGTGCTGCTCGGCGGGGCTCTGTTCGCGCTGTAGCCGCCACTATAGACAGGAGGCGGCTGGGTGTCTGACGAGGCGGGCTGATACATGTTGTTCATGGCGCGTAAAAGAATACACCGAATCTACGTTATGTACAATACTAAACAGTTTACTCTTTCTCTTAACTCTTCACAGGAGCATTATTAAGCTGCCGTCGTCTCTGccgtttcttcttcttcatggtTTATTGGCGGTTGGCAAACCAATTACAGGcgcattaccgccaccaactggactggagtgtgaacga
>TU36157
cttcttcctttcctccACTAGGCGGATCTGCTGCATCCTCCATGTGTTTATGGCAGCCTCTTTGTCCGCGATGCGCTCCTCTCTCTGGGTCTGCTCCAGCTGGAGCTCCCTCCTGGCTCTCCGGAGCCGGGCCCTCCTCTTAGCAACACGGCATACTTTAGTTTTCCAACTCTCTAAACACTCACTGGCACCGAGGACTGCCAGTCTGTCCTGTAGCTCTCTCTTCACCTGTAAAGCCTTTAAATAAGAGTTGGCCCAAACACACTCATTCTCCACGTTGTTCCTCAGAATTTCACAGGACTCTGCCAGCTGGGAGACAATGTGAGCTGCCCCGTACAGAGCCGCTCTCAGCTCCGGGGCAGAGCTGCACGGAGCCGCTCTCTGCTCCGGGGCAGAGCTGCACGGAGCCGCTCTCAGCTCCGGGGCAGAGCTGCACGGGGTCGCTCTCTGCTCCGGGGCAGAGCTGTGTGGCGTCTTGTGCCGGGCCTGTAGGCTCTTGGAGTTTTGTTCTCTATCTTGTAGAAAGCGTCCGAGCCACTGTTGATCCTGCCTCCTCTGAAGGACCGTTTCATCCTCAGGAATCCGGTCATCTTTACCCTGCGGAGGAAACCGAGCTCCACTCGCAGAGAAATCCTCATACTGGTGCTGTTGTTTCTGACTACAGTCCGGGGCATAGCCTGTAGACTGAGGACAGGGTCTAAGCTGCTGGGGAAACGCTCCCCTGCTGCTGTATATGTTTACCGGTGCGCTGGGAACCATGTTAGGGAAGTGTCCGGGCGGCGGACAGCCGAAAGGAGGCGGGGGGACGGAGGGGTCAAATCCATACGGAAGGGCTAAGCCGGGCCCTCCGAAACTTCCTCCTCCGGGAGACTGTGCTGGAAAATCGCACCTAAACCCATACGGGTGAGCGTCATACCCCTGGGAAGGAGTCCACGGTGGAGCAGTGTGGCCCGGCTGAGTGCTGCTCGGCGGGGCTCTGTTCGCGCTGTAGCCGCCACTATAGACAGGAGGCGGCTGGGTGTCTGACGAGGCGGGCTGATACATGTTGTTCATGGCGCGTAAAAGAATACACCGAATCTACGTTATGTACAATACTAAACAGTTTACTCTTTCTCTTAACTCTTCACAGGAGCATTATTAAGCTGCCGTCGTCTCTGccgtttcttcttcttcatggtTTATTGGCGGTTGGCAAACCAATTACAGGcgcattaccgccaccaactggactggagtgtgaacga

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36156 False 1211 lncRNA 0.56 2 13246700 13248009
TU36157 True 1244 lncRNA 0.57 2 13246700 13248009

Neighbor

gene id symbol gene type direction distance location
kbtbd13 NA coding upstream 38365 13204839 ~ 13208335 (+)
si:cabz01068815.1 NA coding upstream 70297 13144507 ~ 13176403 (+)
LOC120556474 NA coding upstream 155265 13089535 ~ 13091435 (+)
LOC120556313 LOC104939823,LOC100707594,LOC101479997,LOC105924362 coding upstream 175368 13065952 ~ 13071332 (+)
LOC120555527 NA coding upstream 684147 12556047 ~ 12562553 (+)
spg21 spg21,LOC102788283 coding downstream 4156 13252165 ~ 13271218 (+)
si:ch211-102l7.3 LOC102292170 coding downstream 430123 13678132 ~ 13696767 (+)
slc1a2a LOC104925837,LOC100698156,LOC102211357,LOC103366006,LOC104946114,LOC101471102 coding downstream 449637 13697646 ~ 13723065 (+)
LOC120556255 apip,LOC102794906 coding downstream 502407 13750416 ~ 13765627 (+)
traf6 LOC103361723 coding downstream 800282 14048291 ~ 14055494 (+)
LOC120556095 NA non-coding upstream 44480 13201417 ~ 13202220 (+)
G27085 NA non-coding upstream 137510 13108962 ~ 13109190 (+)
G27081 NA non-coding upstream 149570 13096831 ~ 13097130 (+)
G27064 NA non-coding upstream 221884 13024501 ~ 13024816 (+)
G27028 NA non-coding upstream 347513 12898975 ~ 12899187 (+)
G27161 NA non-coding downstream 131037 13379046 ~ 13381280 (+)
G27163 NA non-coding downstream 143147 13391156 ~ 13391364 (+)
G27164 NA non-coding downstream 153717 13401726 ~ 13401935 (+)
G27179 NA non-coding downstream 169928 13417937 ~ 13418154 (+)
G27190 NA non-coding downstream 402874 13650883 ~ 13651495 (+)
LOC120556202 NA other upstream 8881 13235235 ~ 13237819 (+)
G27086 NA other upstream 136361 13109757 ~ 13110339 (+)
lto1 oraov1 other upstream 1333978 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 3386700 9814697 ~ 9860000 (+)
asb7 asb7,LOC102792420 other upstream 3569673 9653578 ~ 9677027 (+)
slc35c1 slc35c1 other downstream 423468 13671477 ~ 13676613 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 561926 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 1460553 14708562 ~ 14735176 (+)
kcna4 kcna4 other downstream 1641381 14889390 ~ 14965062 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other downstream 1799868 15047877 ~ 15053622 (+)

Expression


Co-expression Network