G27208 (LOC104946125)


Basic Information

Item Value
gene id G27208
gene name LOC104946125
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13695578 ~ 13696833 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36253
AATAATGCAAAAGTAAAGGACTGAAGCAGAAAtgaaatgagaaaataaaaacaattttggGTTTTAAGCTTGGATCTAGACATATAGAATTCTTTCTTGCCAGCGATAACATCATTAACTCAATTTCAAATTGTTCTAGCTGGGTTGATTGCACTTCATCAAAGACTCAAAATGGCATCTGGtggattttctttattttttttttttcatagagCAGTCTTTATCTTCAAGATTGTGAAAAATACACCTCACAAATATGATAAGGTAACATTCAAAGATCATGAGTATGTGGGTGTATTTCTTAACCAGCTCACGTTGAGTTGTTTGAAGTGGAGGAGCCCAAATACAGAACAATAACATGCACACATACGAGATCCAAGTAGAGCCAGGAAAACAGTTCTTACATGATATTAACAAAGACAGCAGGTACAGAATTATCACCGCAAATGTTGTGTTATTACTATCTGCTCCATCTCCACCATTTCCACtgagagatttaaaaaaaataaatgaaataaatgaatttCAGATTTAAGCTGAGAAAATCACCTTCTCATGATatattgaagaagaaaaaaatctacTGCATGTTTTTCTCTATCCAGTCTCGGAAGTTGGCTATTCGTGTCTGAACTGTGTAAGTCTGTTGGTGGCAGTTCTCTTCCATATAGCTGAAGCTCTCTAAACCAAGAAGCTGCCAGCCTGTGCTGGAGGCTCCCTGAGTCTCCTCGTGACCCAACAAGGCACCACTTGtggaaacaaacacagctggcATGGTTGTGATCCCTGGAATCACATTAGGACAAGGGCTTTGAGGACTGGACGGCTTCCTAATGACACACAGTGTATTGTCACTGATCACTGTGGTATGCGCTCCTCCTTGAGCAAATTCTCTTTCGCACTGAACGACATCACCCAGCTCAACAAGTCTCGTCTGGCTCGGGGGAGTGTAGTGGCTCAGGTGCCTGTGATCGTTTGGTAAAATCCACCTTGCAGTGTAAGCCTCCTGTGCGGTCACCTCTCCACCTTGCACTTTGGGTAGACACACTGGAAACACATGCTCACTGATCTTGACCTTGTCTTTTAGCTTGAGCACAGCCACATTGGAGTCGGGGGCAGAGTAAAAATCTGGATGGACTAAAATGTCTGAAACCTGTTggggcaggcagagagagagagtctgtgaAAATGGATGAAAATAAGAAGCGAGAATACCTGAGAAAGCCtgatgtcaataaaaaaaagtgccaactttt

Function

NR:

description
PREDICTED: inactive serine protease PAMR1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36253 True 1256 lncRNA 0.41 1 13695578 13696833

Neighbor

gene id symbol gene type direction distance location
chst1 chst1 coding downstream 288963 13402324 ~ 13406615 (-)
LOC120555522 NA coding downstream 401317 13285241 ~ 13294261 (-)
LOC120556590 NA coding downstream 406314 13289210 ~ 13289264 (-)
pdcd7 NA coding downstream 447162 13240686 ~ 13248416 (-)
ubap1lb ubap1l,LOC107685210,LOC106932412,LOC103156499,LOC105938593 coding downstream 457326 13208329 ~ 13238252 (-)
LOC120555520 NA coding upstream 26760 13723593 ~ 13727470 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding upstream 270881 13967714 ~ 13995315 (-)
ttc17 ttc17,LOC103361721 coding upstream 320719 14017552 ~ 14048294 (-)
trpm5 trpm5 coding upstream 365203 14062036 ~ 14090460 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding upstream 404296 14101129 ~ 14153448 (-)
G27206 NA non-coding downstream 1330 13693745 ~ 13694248 (-)
G27205 NA non-coding downstream 5981 13689282 ~ 13689597 (-)
G27204 NA non-coding downstream 7350 13687841 ~ 13688228 (-)
G27196 NA non-coding downstream 19075 13675972 ~ 13676503 (-)
G27189 NA non-coding downstream 74727 13620563 ~ 13620851 (-)
G27210 NA non-coding upstream 12086 13708919 ~ 13712268 (-)
G27211 LOC104946114,LOC100698156 non-coding upstream 22365 13719198 ~ 13720596 (-)
G27230 NA non-coding upstream 56873 13753706 ~ 13754074 (-)
G27277 NA non-coding upstream 300280 13997113 ~ 14004611 (-)
G27279 NA non-coding upstream 305017 14001850 ~ 14002747 (-)
G27075 LOC104939823,LOC100707594 other downstream 599812 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 1390754 12304539 ~ 12304824 (-)
G26891 NA other downstream 1733806 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 2026309 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 2185278 11476506 ~ 11510300 (-)
G27321 NA other upstream 772925 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 881194 14578027 ~ 14580011 (-)
G27420 NA other upstream 1145880 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 1353829 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 2374736 16071569 ~ 16159882 (-)

Expression


Co-expression Network