G27220



Basic Information


Item Value
gene id G27220
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 13737183 ~ 13744451 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU36269
GCCTCAGCATAGTATGTGACTACAAATCCCATCCGGCAATGTATCCTGTTTGGATGTCGCATATTGATGACGTGGTGTTAGCAGATTTTGGGttagataacgttagctgttTTGGCATCGTATATTTTAACCACAGACTGACTTCACGGCATAAGTAAGAGTGCATTTCTCAAGGtgtgtctccctctcccttccCAAACAAAGAAGCGTGGATCTCGCTCAATAGTCCCTCCCGG

Function


GO:

id name namespace
GO:0070035 obsolete purine NTP-dependent helicase activity molecular_function
GO:0003678 DNA helicase activity molecular_function
GO:0004386 helicase activity molecular_function

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA


RNA id representative length rna type GC content exon number start site end site
TU36269 True 236 lncRNA 0.46 2 13737183 13744451

Neighbor


gene id symbol gene type direction distance location
slc1a2a LOC104925837,LOC100698156,LOC102211357,LOC103366006,LOC104946114,LOC101471102 coding upstream 14118 13697646 ~ 13723065 (+)
si:ch211-102l7.3 LOC102292170 coding upstream 40416 13678132 ~ 13696767 (+)
spg21 spg21,LOC102788283 coding upstream 465965 13252165 ~ 13271218 (+)
kbtbd13 NA coding upstream 528848 13204839 ~ 13208335 (+)
si:cabz01068815.1 NA coding upstream 560780 13144507 ~ 13176403 (+)
LOC120556255 apip,LOC102794906 coding downstream 5965 13750416 ~ 13765627 (+)
traf6 LOC103361723 coding downstream 303840 14048291 ~ 14055494 (+)
cdkn1ca NA coding downstream 348413 14092864 ~ 14094321 (+)
luzp2 luzp2 coding downstream 538708 14283159 ~ 14463293 (+)
fibinb fibin,LOC103373419,LOC106523552 coding downstream 958528 14702979 ~ 14706234 (+)
G27190 NA non-coding upstream 85688 13650883 ~ 13651495 (+)
G27179 NA non-coding upstream 319029 13417937 ~ 13418154 (+)
G27164 NA non-coding upstream 335248 13401726 ~ 13401935 (+)
G27163 NA non-coding upstream 345819 13391156 ~ 13391364 (+)
G27161 NA non-coding upstream 355903 13379046 ~ 13381280 (+)
G27241 NA non-coding downstream 183748 13928199 ~ 13936728 (+)
LOC120555409 NA non-coding downstream 252662 13997113 ~ 14001647 (+)
G27306 NA non-coding downstream 478858 14223309 ~ 14224234 (+)
G27320 NA non-coding downstream 722027 14466478 ~ 14466680 (+)
LOC120556358 NA non-coding downstream 829746 14574197 ~ 14577703 (+)
slc35c1 slc35c1 other upstream 60570 13671477 ~ 13676613 (+)
LOC120556202 NA other upstream 499364 13235235 ~ 13237819 (+)
G27086 NA other upstream 626844 13109757 ~ 13110339 (+)
lto1 oraov1 other upstream 1824461 11903272 ~ 11912722 (+)
aldh1a3 aldh1a3,LOC106562593,LOC103357544,LOC104941118 other upstream 3877183 9814697 ~ 9860000 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other downstream 65484 13809935 ~ 13856423 (+)
bbox1 bbox1,LOC102798250 other downstream 964111 14708562 ~ 14735176 (+)
kcna4 kcna4 other downstream 1144939 14889390 ~ 14965062 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other downstream 1303426 15047877 ~ 15053622 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 1697004 15441455 ~ 15446492 (+)

Expression



Co-expression Network