G27279


Basic Information

Item Value
gene id G27279
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14001850 ~ 14002747 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36334
ATACGAACGTCGTTCATGCTGTTGGGACAGAGAAGTCACACTGCTGGCTCAGTGGGTTTGTTGTAACAACGGGGGTCTGGACTCCCAAAGTGTACAAGTGTGACCCATGCTTtcaaaacacacgcacgcacacacacacacacacacacacacacacacacacacacacacacacagagtgagttGTAATAGCAtgatgttacacatttaaatggATTTCAATATGAATCCTCTCCAGCTGTGATACCTAAAGTAAGGGAGTGAGTCCACaggtcaattttttttaaaaaaaatactaaaataagGAGTGTTGCCTTGCACCCCTGAACACACTCCAATGTTCTGTATAGGCTCTGCCAGTTCTCCATTAGATACAGGGGAGCGTAGCAGCTATGGAACAGTTACATCAACGCTGCATTTCAGTCAACTTCTgtcaaaaatgattaaaaaaaagaggcttAGGACCTGTCTCATGACCCAAACTTAACTGTCTGTATATTGATCTGAGCTATTCATATTCATGAATAGTTCACATTCATATCTGCTTTTGTTTGGCCTTCCTGTCTCTCATAactactcacacatacacacataagtCCACACATCATCCTTGTATCTATGTTCTCGTAATTTATTTTATGCCTTCGTTGTTTTACGTAGCCAACCTtatgcttgttttgtttttaaattcagGGCATACTTGTGTTCAATTTGTAGATTTTAGGActcttgtaattgtaattttaaatatatataggcctatatatggagctgctccccccgcgacctgacaccggataagcggaagaagatggatggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36334 True 821 lncRNA 0.41 2 14001850 14002747

Neighbor

gene id symbol gene type direction distance location
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding downstream 6535 13967714 ~ 13995315 (-)
LOC120555520 NA coding downstream 274380 13723593 ~ 13727470 (-)
chst1 chst1 coding downstream 595235 13402324 ~ 13406615 (-)
LOC120555522 NA coding downstream 707589 13285241 ~ 13294261 (-)
ttc17 ttc17,LOC103361721 coding upstream 14805 14017552 ~ 14048294 (-)
trpm5 trpm5 coding upstream 59289 14062036 ~ 14090460 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding upstream 98382 14101129 ~ 14153448 (-)
lingo1b LOC103361724 coding upstream 223030 14225777 ~ 14250332 (-)
muc15 NA coding upstream 636239 14638986 ~ 14654184 (-)
G27230 NA non-coding downstream 247776 13753706 ~ 13754074 (-)
G27211 LOC104946114,LOC100698156 non-coding downstream 281254 13719198 ~ 13720596 (-)
G27210 NA non-coding downstream 289582 13708919 ~ 13712268 (-)
G27208 LOC104946125 non-coding downstream 305017 13695578 ~ 13696833 (-)
G27206 NA non-coding downstream 307602 13693745 ~ 13694248 (-)
G27295 NA non-coding upstream 164810 14167557 ~ 14167758 (-)
G27297 NA non-coding upstream 166866 14169613 ~ 14169839 (-)
G27301 NA non-coding upstream 177380 14180127 ~ 14180348 (-)
G27309 NA non-coding upstream 221589 14224336 ~ 14225278 (-)
G27322 NA non-coding upstream 525095 14527842 ~ 14528127 (-)
G27075 LOC104939823,LOC100707594 other downstream 906084 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 1697026 12304539 ~ 12304824 (-)
G26891 NA other downstream 2040078 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 2332581 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 2491550 11476506 ~ 11510300 (-)
G27321 NA other upstream 467011 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 575280 14578027 ~ 14580011 (-)
G27420 NA other upstream 839966 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 1047915 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 2068822 16071569 ~ 16159882 (-)

Expression


Co-expression Network