G27297


Basic Information

Item Value
gene id G27297
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14169613 ~ 14169839 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36359
atgatgaatggactgtgTCCTCTTTGATCAGGTGTGAAAAAATATTGGGCTAATGACAATGTACTGATTAtccattgtttttaaatgtattgagtGGCATTTATTCTGCCTTTTCCTGTTCACAGTCCGTGATGGGAGTGCcactttgtgaatgaatgacGTAATTCAAGAGCTGGACCTGATTGGTCCTGGTTAGTCACCCAAACTATTTAAGGTCTATGGTTgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36359 True 227 lncRNA 0.40 1 14169613 14169839

Neighbor

gene id symbol gene type direction distance location
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding downstream 16165 14101129 ~ 14153448 (-)
trpm5 trpm5 coding downstream 79153 14062036 ~ 14090460 (-)
ttc17 ttc17,LOC103361721 coding downstream 121319 14017552 ~ 14048294 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding downstream 174298 13967714 ~ 13995315 (-)
LOC120555520 NA coding downstream 442143 13723593 ~ 13727470 (-)
lingo1b LOC103361724 coding upstream 55938 14225777 ~ 14250332 (-)
muc15 NA coding upstream 469147 14638986 ~ 14654184 (-)
madd madd coding upstream 570353 14740192 ~ 14804767 (-)
nr1h3 nr1h3,LOC102777562 coding upstream 641606 14811445 ~ 14828395 (-)
LOC120556084 NA coding upstream 708183 14878022 ~ 14881139 (-)
G27295 NA non-coding downstream 1855 14167557 ~ 14167758 (-)
G27277 NA non-coding downstream 165002 13997113 ~ 14004611 (-)
G27279 NA non-coding downstream 166866 14001850 ~ 14002747 (-)
G27230 NA non-coding downstream 415539 13753706 ~ 13754074 (-)
G27211 LOC104946114,LOC100698156 non-coding downstream 449017 13719198 ~ 13720596 (-)
G27301 NA non-coding upstream 10288 14180127 ~ 14180348 (-)
G27309 NA non-coding upstream 54497 14224336 ~ 14225278 (-)
G27322 NA non-coding upstream 358003 14527842 ~ 14528127 (-)
LOC120556357 NA non-coding upstream 403612 14573451 ~ 14577795 (-)
G27344 NA non-coding upstream 443276 14613115 ~ 14613329 (-)
G27075 LOC104939823,LOC100707594 other downstream 1073847 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 1864789 12304539 ~ 12304824 (-)
G26891 NA other downstream 2207841 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 2500344 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 2659313 11476506 ~ 11510300 (-)
G27321 NA other upstream 299919 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 408188 14578027 ~ 14580011 (-)
G27420 NA other upstream 672874 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 880823 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1901730 16071569 ~ 16159882 (-)

Expression


Co-expression Network