G27306


Basic Information

Item Value
gene id G27306
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14223309 ~ 14224234 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36368
TTTCCATCTGcctgtccctttttttttttaaagtactttTAGAGTTAATGAACACACTATCTTCAGAGCAGACCGGACTGTGAAATTAATTACATAAAATCCTTATGAGGCATAAAAGTTAATTTTACACATAAATATTGTATTGCTTAGCTGAAAGCTGGAAAATGTGTTACTTAAGGCAACAAATTAATGTCAGCATTTTTGATATGCACTAGTGACAATATAACCTCAGGACTTGGAAAGAGTGCTCACACTTAAGCTGCCAAATAggtaaacaaattaattttgCACTTGATGATAAATTGCTAATCTGATAGGGTACTCCGAAAAGTTGTAACTCTCTCTTTTGGTTGAATTACATCAAAAACATGAATATCTAATCTGCTCCTTAGATTGTAATGTTTAAAACTCACAGCCATTAACAGCATTACTATTGTGCCATAGCATAATGTACAAGGAAAgaataaaatacagaaaaaatatGTATAGCTGAATATGTTAATACATTTAATGACAAACTTCCTTTGCTGGCAGAAAGGAGCACATATTGTAGGactggcttttttttctcttttattcagTGTGTTAACATGCACGCTTCTAATTTGACTGTAACcagattaaaggtgcactatgagttcttgcatggtttcagcgtgatttcatttttgtctcaaatcgtaggcatctctccttgatccgctagctgcctgccccctgaatacactgtgaaaaagcccggtctcaaGACAACACAGGGGGGTcataaacgtcaaacaaacactataatcattgtttttataaatacaacaaaccacgttccagccagtcaccgacaagatggttgggggagggggtgctTCAAAGCAGCAGCCTTAATTTCAGTGAAAAAGacgcactaacccccaccctctcccccaaccatc

Function

NR:

description
PREDICTED: ATP-dependent DNA helicase Q1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36368 True 926 lncRNA 0.37 1 14223309 14224234

Neighbor

gene id symbol gene type direction distance location
cdkn1ca NA coding upstream 128988 14092864 ~ 14094321 (+)
traf6 LOC103361723 coding upstream 167815 14048291 ~ 14055494 (+)
LOC120556255 apip,LOC102794906 coding upstream 457682 13750416 ~ 13765627 (+)
slc1a2a LOC104925837,LOC100698156,LOC102211357,LOC103366006,LOC104946114,LOC101471102 coding upstream 500244 13697646 ~ 13723065 (+)
si:ch211-102l7.3 LOC102292170 coding upstream 526542 13678132 ~ 13696767 (+)
luzp2 luzp2 coding downstream 58925 14283159 ~ 14463293 (+)
fibinb fibin,LOC103373419,LOC106523552 coding downstream 478745 14702979 ~ 14706234 (+)
LOC120555721 arl14ep,LOC102778030,LOC103375558 coding downstream 628051 14852285 ~ 14864789 (+)
ddb1 ddb1 coding downstream 855560 15079794 ~ 15154115 (+)
taldo1 taldo1,LOC102780893 coding downstream 1137965 15362199 ~ 15374072 (+)
LOC120555409 NA non-coding upstream 221662 13997113 ~ 14001647 (+)
G27241 NA non-coding upstream 286581 13928199 ~ 13936728 (+)
G27220 NA non-coding upstream 478858 13737183 ~ 13744451 (+)
G27190 NA non-coding upstream 571814 13650883 ~ 13651495 (+)
G27179 NA non-coding upstream 805155 13417937 ~ 13418154 (+)
G27320 NA non-coding downstream 242244 14466478 ~ 14466680 (+)
LOC120556358 NA non-coding downstream 349963 14574197 ~ 14577703 (+)
G27356 NA non-coding downstream 459599 14683833 ~ 14684116 (+)
G27358 NA non-coding downstream 506583 14730817 ~ 14731646 (+)
G27432 NA non-coding downstream 733266 14957500 ~ 14957867 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other upstream 366886 13809935 ~ 13856423 (+)
slc35c1 slc35c1 other upstream 546696 13671477 ~ 13676613 (+)
LOC120556202 NA other upstream 985490 13235235 ~ 13237819 (+)
G27086 NA other upstream 1112970 13109757 ~ 13110339 (+)
lto1 oraov1 other upstream 2310587 11903272 ~ 11912722 (+)
bbox1 bbox1,LOC102798250 other downstream 484328 14708562 ~ 14735176 (+)
kcna4 kcna4 other downstream 665156 14889390 ~ 14965062 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other downstream 823643 15047877 ~ 15053622 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 1217221 15441455 ~ 15446492 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other downstream 1250913 15475147 ~ 15486451 (+)

Expression


Co-expression Network