LOC120556476


Basic Information

Item Value
gene id LOC120556476
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14578027 ~ 14580011 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36407
atagatgtaTTCAATAGTTGTTTTTACTGAAAAGAATGAGACCGAGGTTATACCAAGTGACTGGCTGAGCATCGACaaaaaagtttccttttggccCCCATATAACGGTACAAGATGTAGAAAAgcagttgaaaaaaatgaaactcCTGATGAAGAATGGGACGAATATGAAACTGAATGGGTGGCTGAGTATGGTAAGTTATTGAGTAAGTATTAAGAAATATAGAGAAATAACTATTCAAATCTATTGCTCAAAATTAAAGATGCTCCTTGTGAGCTATGCCTAGACAAGCAgttcttttcaaatgttcagatAATAGGTTTAGTGATGTTGTTTGTTTCTATATTTAGGTTCCTATGAAAAAGCCAGAAGAAAGCTGGTGAAGTTCTGTGAAGGCAACAGTTTGGAGTCTACAGATGAGGACAGTGTACGGAAAAGAGTACCATCGGCAAAATATGTAAATGGATTTACATCTGGTACAGCCTCAGGAAGACCTCCAGTGCAGGCCTCAACAAGCCGGCTCCACACAGAGACAATGGAAAGACCAAAAAAGAAATTCTGCAGTAATGGAGCCAAAAGCCTGACCTTGCCAACCATACCTCTATTTGCACCATCAGCACCTGCTGTGACAGTCCCTGAACCAAGACAAGATGGCACGTATAACTATTCCAAACCTTTTACAATAGTTTACTTGGAGTTTTTAGCAATTACCCTTTTAGTCTATAACATGAATTAGAAACTGTTCaagtaacaaaaataaaatgaatgtaaCCAAAAAGAACTTTGCCTGGCTAAGTTTTACTATTTTCAAATGACAAACCCTTTT
>XM_039796120.1
ttttatagatgtaTTCAATAGTTGTTTTTACTGAAAAGAATGAGACCGAGGTTATACCAAGTGACTGGCTGAGCATCGACaaaaaagtttccttttggccCCCATATAACGGTACAAGATGTAGAAAAgcagttgaaaaaaatgaaactcCTGATGAAGAATGGGACGAATATGAAACTGAATGGGTGGCTGAGTATGGTTCCTATGAAAAAGCCAGAAGAAAGCTGGTGAAGTTCTGTGAAGGCAACAGTTTGGAGTCTACAGATGAGGACAGTGTACGGAAAAGAGTACCATCGGCAAAATATGTAAATGGATTTACATCTGGTACAGCCTCAGGAAGACCTCCAGTGCAGGCCTCAACAAGCCGGCTCCACACAGAGACAATGGAAAGACCAAAAAAGAAATTCTGCAGTAATGGAGCCAAAAGCCTGACCTTGCCAACCATACCTCTATTTGCACCATCAGCACCTGCTGTGACAGTCCCTGAACCAAGACAAGATGAAAGAGAACTCCGGCTCTATCAGATGCTGGAAGAGATAAAGGGTCAAGTCAGGCAGAATTCGCTCCTCCTTCAGGCCATACTGAGAAGAGAGAATGCAGCTGAAGTTGTAAATGAGGAATTTCAGTTTCCTTTAAGGAGCATGACAGGCATAAAAGATCTGGAGGATAGGCTgtcaaacagagacacacaacgtTCTCTAACAAGATATCTTACCAGCTTGGGTGGAACATCTGCCAAAGACATTGTCCACAGAATCATGAGGGAAATTATGACCAATGAGTTGGCCAACAATTTTAATTGGCCAAGGAGAGGACAGAAGAGCCCCTTTTCTGCGCTCTTGCTGGCAAAAGTTGTCATAGGtgatatgttttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36407 False 827 lncRNA 0.37 3 14578811 14580007
XM_039796120.1 True 875 mRNA 0.43 6 14578027 14580011

Neighbor

gene id symbol gene type direction distance location
lingo1b LOC103361724 coding downstream 327695 14225777 ~ 14250332 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding downstream 424579 14101129 ~ 14153448 (-)
trpm5 trpm5 coding downstream 487567 14062036 ~ 14090460 (-)
ttc17 ttc17,LOC103361721 coding downstream 529733 14017552 ~ 14048294 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding downstream 582712 13967714 ~ 13995315 (-)
muc15 NA coding upstream 58975 14638986 ~ 14654184 (-)
madd madd coding upstream 160181 14740192 ~ 14804767 (-)
nr1h3 nr1h3,LOC102777562 coding upstream 231434 14811445 ~ 14828395 (-)
LOC120556084 NA coding upstream 298011 14878022 ~ 14881139 (-)
LOC120556194 cd151,LOC104922780,LOC103368535 coding upstream 437553 15017564 ~ 15043882 (-)
LOC120556357 NA non-coding downstream 232 14573451 ~ 14577795 (-)
G27322 NA non-coding downstream 49900 14527842 ~ 14528127 (-)
G27309 NA non-coding downstream 352749 14224336 ~ 14225278 (-)
G27301 NA non-coding downstream 397679 14180127 ~ 14180348 (-)
G27297 NA non-coding downstream 408188 14169613 ~ 14169839 (-)
G27344 NA non-coding upstream 33104 14613115 ~ 14613329 (-)
LOC120556013 NA non-coding upstream 112198 14692209 ~ 14708662 (-)
G27395 fibin,LOC103373419,LOC106523552 non-coding upstream 123048 14703059 ~ 14706216 (-)
G27425 arl14ep,LOC102778030 non-coding upstream 274714 14854725 ~ 14862463 (-)
G27433 NA non-coding upstream 309766 14889777 ~ 14890063 (-)
G27321 NA other downstream 107682 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 1482261 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 2273203 12304539 ~ 12304824 (-)
G26891 NA other downstream 2616255 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 2908758 11643231 ~ 11669269 (-)
G27420 NA other upstream 262702 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 470651 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1491558 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 1741952 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 2613502 17193513 ~ 17284509 (-)

Expression


Co-expression Network