G27344


Basic Information

Item Value
gene id G27344
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14613115 ~ 14613329 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36413
GGCTCTTGTTCGTCTCCGGCTTCCCTTGCCGCCACCGGTGTCTGGTCTCCATTGGGGGATGTGTTTGGTTTTCCTAAACCAAAGAATTGTATAGATACCCTTCCAATGGAGACTAATCTCCAAAACTACTTATGTTCCAAATACTTATGTCTATGtacttgttttcttctattaaacgtttgcatatctgcaacggagtctctcctgattgaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36413 True 215 lncRNA 0.42 1 14613115 14613329

Neighbor

gene id symbol gene type direction distance location
lingo1b LOC103361724 coding downstream 362783 14225777 ~ 14250332 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding downstream 459667 14101129 ~ 14153448 (-)
trpm5 trpm5 coding downstream 522655 14062036 ~ 14090460 (-)
ttc17 ttc17,LOC103361721 coding downstream 564821 14017552 ~ 14048294 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding downstream 617800 13967714 ~ 13995315 (-)
muc15 NA coding upstream 25657 14638986 ~ 14654184 (-)
madd madd coding upstream 126863 14740192 ~ 14804767 (-)
nr1h3 nr1h3,LOC102777562 coding upstream 198116 14811445 ~ 14828395 (-)
LOC120556084 NA coding upstream 264693 14878022 ~ 14881139 (-)
LOC120556194 cd151,LOC104922780,LOC103368535 coding upstream 404235 15017564 ~ 15043882 (-)
LOC120556357 NA non-coding downstream 35320 14573451 ~ 14577795 (-)
G27322 NA non-coding downstream 84988 14527842 ~ 14528127 (-)
G27309 NA non-coding downstream 387837 14224336 ~ 14225278 (-)
G27301 NA non-coding downstream 432767 14180127 ~ 14180348 (-)
G27297 NA non-coding downstream 443276 14169613 ~ 14169839 (-)
LOC120556013 NA non-coding upstream 78880 14692209 ~ 14708662 (-)
G27395 fibin,LOC103373419,LOC106523552 non-coding upstream 89730 14703059 ~ 14706216 (-)
G27425 arl14ep,LOC102778030 non-coding upstream 241396 14854725 ~ 14862463 (-)
G27433 NA non-coding upstream 276448 14889777 ~ 14890063 (-)
G27438 NA non-coding upstream 336249 14949578 ~ 14949985 (-)
LOC120556476 NA other downstream 33104 14578027 ~ 14580011 (-)
G27321 NA other downstream 142770 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 1517349 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 2308291 12304539 ~ 12304824 (-)
G26891 NA other downstream 2651343 11960701 ~ 11961772 (-)
G27420 NA other upstream 229384 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 437333 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1458240 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 1708634 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 2580184 17193513 ~ 17284509 (-)

Expression


Co-expression Network