G27358


Basic Information

Item Value
gene id G27358
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14730817 ~ 14731646 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36433
tgtttaataaataatcgtttacccccagccctagttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcccaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctacagttagctacagtaggaactggattaaacacggctaaaatgctgacagctaaactgcTGACTTATGACCGACTGCTATCTGTTGTCCTCACGTTACTCTCTGTCCTCCTG
>TU36436
tgtttaataaataatcgtttacccccagccctagttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcccaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctaccgttagctacagtaaacactaataacacgttacacagcaggtaacgttagcctacagttagctacagtaggaactggattaaacacggctaaaatgctgacagctaaactgcTGACTTATGACCGACTGCTATCTGTTGTCCTCACGTTACTCTCTGTCCTCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36433 False 445 lncRNA 0.43 2 14730817 14731646
TU36436 True 500 lncRNA 0.43 2 14730817 14731646

Neighbor

gene id symbol gene type direction distance location
fibinb fibin,LOC103373419,LOC106523552 coding upstream 24583 14702979 ~ 14706234 (+)
luzp2 luzp2 coding upstream 267524 14283159 ~ 14463293 (+)
cdkn1ca NA coding upstream 636496 14092864 ~ 14094321 (+)
traf6 LOC103361723 coding upstream 675323 14048291 ~ 14055494 (+)
LOC120556255 apip,LOC102794906 coding upstream 965190 13750416 ~ 13765627 (+)
LOC120555721 arl14ep,LOC102778030,LOC103375558 coding downstream 120639 14852285 ~ 14864789 (+)
ddb1 ddb1 coding downstream 348148 15079794 ~ 15154115 (+)
taldo1 taldo1,LOC102780893 coding downstream 630553 15362199 ~ 15374072 (+)
LOC120556051 NA coding downstream 642542 15374188 ~ 15392333 (+)
LOC120555952 LOC103368873 coding downstream 662138 15393784 ~ 15418775 (+)
G27356 NA non-coding upstream 46701 14683833 ~ 14684116 (+)
LOC120556358 NA non-coding upstream 153114 14574197 ~ 14577703 (+)
G27320 NA non-coding upstream 264137 14466478 ~ 14466680 (+)
G27306 NA non-coding upstream 506583 14223309 ~ 14224234 (+)
LOC120555409 NA non-coding upstream 729170 13997113 ~ 14001647 (+)
G27432 NA non-coding downstream 225854 14957500 ~ 14957867 (+)
LOC120556117 NA non-coding downstream 268058 14999704 ~ 15000287 (+)
G27449 NA non-coding downstream 284938 15016584 ~ 15017505 (+)
G27459 NA non-coding downstream 330573 15062219 ~ 15065509 (+)
G27565 rps17,LOC101480409,LOC100699764,LOC107389132 non-coding downstream 792328 15523974 ~ 15531915 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other upstream 874394 13809935 ~ 13856423 (+)
slc35c1 slc35c1 other upstream 1054204 13671477 ~ 13676613 (+)
LOC120556202 NA other upstream 1492998 13235235 ~ 13237819 (+)
G27086 NA other upstream 1620478 13109757 ~ 13110339 (+)
lto1 oraov1 other upstream 2818095 11903272 ~ 11912722 (+)
kcna4 kcna4 other downstream 157744 14889390 ~ 14965062 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other downstream 316231 15047877 ~ 15053622 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 709809 15441455 ~ 15446492 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other downstream 743501 15475147 ~ 15486451 (+)
LOC120555788 NA other downstream 2992899 17724545 ~ 17743448 (+)

Expression


Co-expression Network