G27425 (arl14ep,LOC102778030)


Basic Information

Item Value
gene id G27425
gene name arl14ep,LOC102778030
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14854725 ~ 14862463 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36523
cgaaagctagcgttagcagctaaccaccgggTTACGGTAGGTcgtttaaagctacattgtgtaagaattactcccatctagcgttgagatcatatatcgcaatcaactctctctcgccacgcagtattgtaactacggtagccttcacgcttcaaaaagcgaaggtgtacaaaaggccgtctatcagccgtcattgttggagttcatacgttctcttaatacatccatgagttgcGTCGGAGAGCGCCAGGACAACGAGCGGCGGCACGCGACGCGCACCCCgacggaaaggagagagaaagaaaaggagactgcagcggtccggaggataattaactagttgggatttggtgtgtgcctccaaagcagctccaatgttGACTCTTTttccggtctcttgctcttttcaatatccgttttctttttctgggggAAGAAGAAGGATTTGGGATTTTTTTGGGATTTTGAATAcctgtggtcctccatgtttccttcttcaaacttgccagggCCAGAAAGCGACAATACCCATTAGCagtcgaaaacgcgaaaggcggagcagtatagcctgtatgtcccttaccggctaacgcatttcaagatggcgcatcattatggagcgtctaccccaggtcatgcaagcgcaaatgtaaaattccaagccaataggaatacttgaaattgatggtggtggtcaatattcatgaaaaaggacacatttgtgaagggcaatacagattttgataatgaacaactacaaacgttacacactggggctttaaaGCTAAAGATGCATTctattagcatgaaaacagatcccagagaacgttcgACTCGTTCGAtacgttattaacccctaggttcattttgcgccggaattgtcctttaaagctGAATACAGCTGCCTTCTACTCAGAGTGCTGCATTTTATTCTGTTCGATTAAAAGAAGGAGTCCGACTctaatccaatacactttttgtcaaattctgTGACTTATCTCCTTGCGGCCCACTAGCTGTTCGTTCTGTGTCTGCGCTGAAAAGAAAGCCAATGTTCATACACAGCCTTGGCTCTGTCTGGCCCTGGATGTATAAGGAGAACCTTTAAGCTTCTGTGGGAGGGAAATGTATACGTCTGCCTCGTCAACAACGGATTTCTAATTGGTAAATGTTGGCGGTTGTAGAAACTAACAtttgctctttgtttttttagacaCAGACATCAAAACCTTAAGTGATGTTCAGGTTGGACAAGGTTTCCTGCTATCGAAACGTATTGTACATGTGCTGAAAATATCTCACATATGCATATACTGTCTGCGTTTGGGTCAGTTATTCGTGTCAGAAAAGAGAAATACATCACAAATTACATCGTGACCACAAATATGTAAGATATGGGTCACAGACAGTTCCAAGTCTTTTTCTTTTGGGTGTACTTTTCGGTTTCACAAGAAAGTCTGGTGATGGCCACATTGCAAATTGATTCAGAAGAAGAACATTTTTCGAGTGAACAAGCATCAGGCTTATCTGGGATGGGGATACATGATGAAAAGAGCTCAGTGTTTCAAAGGACACTCATTCACTTCTCTGAATATAAGAGATAAAGAGGTGAATACCTTAAAGAAATATATTACAGTAAGAAAGaggaaacacccacacacagcctCACCTGTCAGAAGGTTGTTTTCCTCCACGGCCTCCTCGTCCGCCCCTCATTCCTCCTCTTTTTTCCCTGCGTAGACTGGCGCCCTCTTTCGCTCGGTCTCTTTCTGCTTGCGTTCCCGTTTGATTTGCAACATTTGTCTCCTTTGGTACCACCCCTCTTTTACGCAGTTCAATCTTTGATGAATCCTGCCCCTGGGTGAATATGGTGGGCACTGCATCCTCCCTCAGAAACTGTTTGCCATTGTAATCCCTGAAGCAGTCGGTCCTGAAATGCTCTGAGCAGAGGCAGGTGTTGGCAGTTGGGATGAAGTTTTTCATCCCCAGGCTTTGTACCCATTTGCTGGCAAGCTGAGGTTTGCTGAGTGGGAACCTAAATACACAGAAGAGAGAATAGATGTTTTCAATAGAGATGCACCAATAGACCGGCAGGTGACTGGAATTGGCCAGTTTTCActtgctcggccatgaccggcgaccggcaggtcagtctgacatatgccgatttcatgccggtcaaccaaaatcaaattttttttagttggatattggatgtgaaaagaaggaaatggttctaataTTGCACatcagatgtgtgtgaatttcccacaccaggagtaatttctatagttctattttatagtgatccattatctgttcaaaaaatttctatgttctgtgcaaaatgttctattaaagaaaagattaaaaaaatatatatttgcgtGTGCtttaaagtggttagaaaaaaatgaaatcggaatcggctaaaatcggtatcggctggtctaactcaatgaaaatcggAATTGACCTataaagttgtaatcggtgcatctctagttttcAAACTAGGCTGCATGATTTCAACATTCACACCTATCGACGATTAATGTTAGTACTGTCTTCCGGCAggcaaattgatgcatttgcg

Function

symbol description
arl14ep Predicted to enable metal ion binding activity and sequence-specific DNA binding activity. Predicted to be located in nucleus. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human ARL14EP (ADP ribosylation factor like GTPase 14 effector protein).

NR:

description
PREDICTED: ARL14 effector protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36523 True 2596 lncRNA 0.43 3 14854725 14862463

Neighbor

gene id symbol gene type direction distance location
nr1h3 nr1h3,LOC102777562 coding downstream 26330 14811445 ~ 14828395 (-)
madd madd coding downstream 49958 14740192 ~ 14804767 (-)
muc15 NA coding downstream 200541 14638986 ~ 14654184 (-)
lingo1b LOC103361724 coding downstream 604393 14225777 ~ 14250332 (-)
kcnq1.1 kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082 coding downstream 701277 14101129 ~ 14153448 (-)
LOC120556084 NA coding upstream 15559 14878022 ~ 14881139 (-)
LOC120556194 cd151,LOC104922780,LOC103368535 coding upstream 155101 15017564 ~ 15043882 (-)
tspan4a tspan4,LOC102780031,LOC107381782 coding upstream 319257 15181720 ~ 15356059 (-)
LOC120555953 LOC104955210,LOC103368874,LOC100700844,LOC104922787,LOC101483392 coding upstream 556489 15418952 ~ 15427599 (-)
LOC120556362 slc25a44,LOC104955209 coding upstream 570959 15433422 ~ 15437488 (-)
LOC120556013 NA non-coding downstream 146063 14692209 ~ 14708662 (-)
G27395 fibin,LOC103373419,LOC106523552 non-coding downstream 148509 14703059 ~ 14706216 (-)
G27344 NA non-coding downstream 241396 14613115 ~ 14613329 (-)
LOC120556357 NA non-coding downstream 276930 14573451 ~ 14577795 (-)
G27322 NA non-coding downstream 326598 14527842 ~ 14528127 (-)
G27433 NA non-coding upstream 27314 14889777 ~ 14890063 (-)
G27438 NA non-coding upstream 87115 14949578 ~ 14949985 (-)
G27440 NA non-coding upstream 90222 14952685 ~ 14953344 (-)
G27441 NA non-coding upstream 91075 14953538 ~ 14953891 (-)
G27450 NA non-coding upstream 154127 15016590 ~ 15017488 (-)
G27420 NA other downstream 10820 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 274714 14578027 ~ 14580011 (-)
G27321 NA other downstream 384380 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 1758959 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 2549901 12304539 ~ 12304824 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 188199 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1209106 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 1459500 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 2331050 17193513 ~ 17284509 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 2645660 17508123 ~ 17513168 (-)

Expression


Co-expression Network