G27459


Basic Information

Item Value
gene id G27459
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 15062219 ~ 15065509 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36562
gaaagaggacagaaagaggacagaaagaagaaaaaggacagaaagagggaagaagaaagaggaaagaggacagggagcgagaggacagaaagagggaagaagaaagaggacagaaagaggaaagaggacagggagcgagaggacagaaagagggaagaagaaagaggacagaaagaggaaagaggacagggagcgagaggacagaaagaggaaagaaagaagacagaggacagagggaagaataaagagggaagaaagaggacagaaagaggaaagagaacagagagcaagagaacagaaagaggaaagaagaaaggacagaaagaggacagaaagaagaaagaagaaagaggacagagaggaacgAAGAGGtaaggaagaggaaagagaacagaggacagaaagaggaaagagaaaagagagcgagaggacagaaagagaacagaggacagaaagaggaaagaagacagaaagaggaaagaagaaagaggacagaaagaggatggacagacagagaagacagacggacagaagtggaaggccaaagagactactgttcatgttactgcctgtagtatctgtatagactactgttcatattactgcctgtagtatctgtatagactactgttcatattactgcctgtagtatctgggtgtgtgtctgtgaaagtgttgtcatggtaaccatggcctgggaatgtttacttgctttgatgtctgtaatcaagctaacgagcctgtcacctgctgaatctgtcagctgtgctgtgctgcagctattcagagtccctgagagcgagctcccaaacaaagcctcactgtggcaacaccataactgctatcagtcaaatgacgtgatcctgagcatcacaaggcctttgtgaacgtatcggtataaaatttatatggataaacgtaaaaatgtggtcatatcagcgatttcaaaaagtggttcgttcagtgtttcgctgggaaatatctaggagtttgatcattgaagccaatggagaacgatatggacatcttgtcatttggaagctcaaccagccaaaagtaaaaggcgtatcacaaaactgagcagattttctgaaactagacaaaaatacctacgttttgatgtataaattgtgtatgacaagtagatattgtgggcgtgagagcagtttacagacaaggaactaagataattttttcgaagcttcaccctctagctgtgatgtcatccactctagcaaacgcaatacacaccctgtttaatcgataaaatttcctgaaataatcactaaacttaaacagatttttcacaaaaactgtaaaagatatcaaaacactgagcacaccccgaatacctgaatattttgtgaacattttacattttgaatcacgtctgtaggtggaagaatgtaggaggagatacatgttgaagcagaagaggatttcaagttgttgaaggctgctctcattcacttcaatgttaaaaaaaagtgttaaaaagcttaaaatttgaaaaagtataaatagtagaaaaaaagttgaagaagtcccatcattagctgaaagagctgaacatttgaaaagttgaatggtttaaataggtgaaagtatgcagaagttacagagagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36562 True 1627 lncRNA 0.41 2 15062219 15065509

Neighbor

gene id symbol gene type direction distance location
LOC120555721 arl14ep,LOC102778030,LOC103375558 coding upstream 197430 14852285 ~ 14864789 (+)
fibinb fibin,LOC103373419,LOC106523552 coding upstream 355985 14702979 ~ 14706234 (+)
luzp2 luzp2 coding upstream 598926 14283159 ~ 14463293 (+)
cdkn1ca NA coding upstream 967898 14092864 ~ 14094321 (+)
traf6 LOC103361723 coding upstream 1006725 14048291 ~ 14055494 (+)
ddb1 ddb1 coding downstream 14285 15079794 ~ 15154115 (+)
taldo1 taldo1,LOC102780893 coding downstream 296690 15362199 ~ 15374072 (+)
LOC120556051 NA coding downstream 308679 15374188 ~ 15392333 (+)
LOC120555952 LOC103368873 coding downstream 328275 15393784 ~ 15418775 (+)
cpeb1b cpeb1 coding downstream 424890 15490399 ~ 15504450 (+)
G27449 NA non-coding upstream 44714 15016584 ~ 15017505 (+)
LOC120556117 NA non-coding upstream 61932 14999704 ~ 15000287 (+)
G27432 NA non-coding upstream 104352 14957500 ~ 14957867 (+)
G27358 NA non-coding upstream 330573 14730817 ~ 14731646 (+)
G27356 NA non-coding upstream 378103 14683833 ~ 14684116 (+)
G27565 rps17,LOC101480409,LOC100699764,LOC107389132 non-coding downstream 458465 15523974 ~ 15531915 (+)
G27566 NA non-coding downstream 468494 15534003 ~ 15535415 (+)
G27567 NA non-coding downstream 479982 15545491 ~ 15545779 (+)
G27568 NA non-coding downstream 480935 15546444 ~ 15546655 (+)
G27613 NA non-coding downstream 753099 15818608 ~ 15819369 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 8597 15047877 ~ 15053622 (+)
kcna4 kcna4 other upstream 97157 14889390 ~ 14965062 (+)
bbox1 bbox1,LOC102798250 other upstream 327043 14708562 ~ 14735176 (+)
lrrc4cb LOC104946080,LOC107396660,LOC103367510,LOC108234802,LOC101071141 other upstream 1205796 13809935 ~ 13856423 (+)
slc35c1 slc35c1 other upstream 1385606 13671477 ~ 13676613 (+)
LOC120556433 psma4,psa4,LOC106562664 other downstream 375946 15441455 ~ 15446492 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other downstream 409638 15475147 ~ 15486451 (+)
LOC120555788 NA other downstream 2659036 17724545 ~ 17743448 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 3496364 18561873 ~ 18575942 (+)
LOC120555697 NA other downstream 4008799 19074308 ~ 19087064 (+)

Expression


Co-expression Network