G27497


Basic Information

Item Value
gene id G27497
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 15180739 ~ 15181020 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36611
aagggtgtttagcatggtacgaaagattgttccagagaataggaagacgttagacaacagaactgtttgcgctctactctcatgtaaaatgaaccactctggcccagcccacaaatacactccttccacaacagtcttaaagaatgcaaagtctgcaagaaatttgtacaataactcactaaagaaaagttatgtgaaattaaaagaaaaactgtaaaagaaaagcaatatgaaatgaaaagaatgtgtggaatgaaaataaaatgtaaatgtaaagacaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36611 True 282 lncRNA 0.34 1 15180739 15181020

Neighbor

gene id symbol gene type direction distance location
LOC120556194 cd151,LOC104922780,LOC103368535 coding downstream 136857 15017564 ~ 15043882 (-)
LOC120556084 NA coding downstream 299600 14878022 ~ 14881139 (-)
nr1h3 nr1h3,LOC102777562 coding downstream 352344 14811445 ~ 14828395 (-)
madd madd coding downstream 375972 14740192 ~ 14804767 (-)
muc15 NA coding downstream 526555 14638986 ~ 14654184 (-)
tspan4a tspan4,LOC102780031,LOC107381782 coding upstream 700 15181720 ~ 15356059 (-)
LOC120555953 LOC104955210,LOC103368874,LOC100700844,LOC104922787,LOC101483392 coding upstream 237932 15418952 ~ 15427599 (-)
LOC120556362 slc25a44,LOC104955209 coding upstream 252402 15433422 ~ 15437488 (-)
LOC120556400 rps17,LOC100699764,LOC107389132 coding upstream 343324 15524344 ~ 15532010 (-)
csnk1g1 csnk1g1,LOC103370372 coding upstream 355954 15536974 ~ 15578092 (-)
G27493 ddb1,LOC102208280,LOC106561926 non-coding downstream 26624 15149500 ~ 15154115 (-)
G27450 NA non-coding downstream 163251 15016590 ~ 15017488 (-)
G27441 NA non-coding downstream 226848 14953538 ~ 14953891 (-)
G27440 NA non-coding downstream 227395 14952685 ~ 14953344 (-)
G27438 NA non-coding downstream 230754 14949578 ~ 14949985 (-)
G27499 taldo1 non-coding upstream 181014 15362034 ~ 15374091 (-)
G27545 psa4,psma4,LOC106562664 non-coding upstream 263306 15444326 ~ 15446509 (-)
G27551 rbpms2,LOC107381790,LOC104957780 non-coding upstream 294233 15475253 ~ 15482686 (-)
G27552 NA non-coding upstream 298286 15479306 ~ 15505668 (-)
G27554 NA non-coding upstream 302090 15483110 ~ 15486465 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other downstream 101909 15050662 ~ 15078830 (-)
G27420 NA other downstream 336834 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 600728 14578027 ~ 14580011 (-)
G27321 NA other downstream 710394 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 2084973 13069996 ~ 13095766 (-)
LOC120556162 znf609 other upstream 890549 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 1140943 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 2012493 17193513 ~ 17284509 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 2327103 17508123 ~ 17513168 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other upstream 2418730 17599750 ~ 17601390 (-)

Expression


Co-expression Network