G27499 (taldo1)


Basic Information

Item Value
gene id G27499
gene name taldo1
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 15362034 ~ 15374091 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36613
CagtataacaaaaacaaaatttatTGACAGAGATTTTTATTCATTGAAAAAGCAAAAGATTATATTCTGAGGAATGATGGTACAATGGTCTTTATCAAGCTCTACCCTCAACCCCCATCCAAATGGTGTTGACAATTGTGGTCCTTTCCTGCCAAAAAAGTGCCCATGGTCCTTTCCAGCAGTCACATGATATTACTCAGCAATACCAAAACTAATTAAGACATTAAACGTTTTTTACCCTTTTCTGGTCAAATTTCTAGTAAATATTAAGACTATTTCACGTCAACTCCACACCAACATTAGCATCAATCACCATGTATGTTTGGTCAGAAGACAGACGAGAGTTAATCCCAGCCTAAACAGAGGAAAGGTGTCCATTCAGGAGAAGGGTCCCTGGAGTTTGGTCAGATTAGGAGATGCCAAATCTGTTAACTACTGGCCGTTTTTAACATTGAGAATTTTCTcctgtgaaaaagaaaaaacaggcaGAGTCAAAAACAC
>TU36615
CagtataacaaaaacaaaatttatTGACAGAGATTTTTATTCATTGAAAAAGCAAAAGATTATATTCTGAGGAATGATGGTACAATGGTCTTTATCAAGCTCTACCCTCAACCCCCATCCAAATGGTGTTGACAATTGTGGTCCTTTCCTGCCAAAAAAGTGCCCATGGTCCTTTCCAGCAGTCACATGATATTACTCAGCAATACCAAAACTAATTAAGACATTAAACGTTTTTTACCCTTTTCTGGTCAAATTTCTAGTAAATATTAAGACTATTTCACGTCAACTCCACACCAACATTAGCATCAATCACCATGTATGTTTGGTCAGAAGACAGACGAGAGTTAATCCCAGCCTAAACAGAGGAAAGGTGTCCATTCAGGAGAAGGGTCCCTGGAGTTTGGTCAGATTAGGAGATGCCAAATCTGTTAACTACTGGCCGTTTTTAACATTGAGAATTTTCTcTTTGATCATGGTCTCCAGCTTGATGGCATCAGCAGCGAACTTGCGGATGCCGTCAGACAGTTTCTCCACGGCCATGCGGTCCTCATTGTGCTGCCAGCGGAAATCCTTCTCATCTAGGTGGATCTTCTCCAGATCACAGGCCttggCTTTCTCTACATTGAGCATCTCTGTGACGGTGCTGTGGTCCTGGCTTAGCTCCGCTAGCAGCCCAGGGGAGATGGTGAGCAGATCACAGCCTGCCAGGGCTTTCACTTCCCCCGTGTTTCTGAAGGAGGCGCCCATCACCACCGTGCTGTAGCCAAACTTCTTGTAGTAGTTGTAAATCTTGGTCACACTCAGCACCTGGGTCTTCGTGGGGCTCGTAGCTTGTGCGGCCTGTATTCTCCTTGTGCCAGTCGAGGATGCGTCCAACGAAGGGTGATATAAGTGTTACCTTTCCTTCTGCACAGGCCACAGCCTGAGCAAAAGAGAACAGCAGGGTCATGTTGCAGTGAACGCCGTGCTTCTCCTCGAGTTccCTGCCAGCCTGGATTCCTTCCCATGTGGATGACAGCTTGATGAGCACACGCTCCTTGTCAATGCCTGCTTCTTTGTAGAGAGCGATGAACCTCAGGGCCTTGGCGACCATTTCATCTTTATCGAAAGATAGCCTGGCATCCACCTCAGTAGAGACTCTGCCTGGGACCTTCTTGAGGATCTCTAGCCCGAAAGTCACAAACAGCTTGTCCATTGTGTTGGCGACCTGCTCCTCTTCAGTTCCGCCTTTGGCGATGCCGTATTTAATGGCCTGATCCAacaggtgctggtaggcaggcATCTTGGCAGCAGCCAGGATAAGAGAAGGGTTAGTGGTGGCATCTTGTGGCTTGTACTCGTCAATGGCGTTAAAATCCCCGGTGTCTGCCACCACCACAGtgtgtttcctcagctggttcagCGCTGACTCCATTTTTCGCCGTTTGTCTGGTGACACAGTAGACATGATGAGAGACTGGGACCCTTTTATACACAGAAAACACGTGAGAGCAGGCGGAATGTCAGAGAGACGGGAGCGCGCAACGCAAGAAAGGAGTCAGCGGGAGCGCGCTCTGGACAGAGAAGACTTCCAGGAGCTCGTGCAGAATTGAGTAGTAATTTTGCTCTATCTCGGctttaggaaaaaaaagaggacggCGAGAAATTTTGGGGACTACTTTTGCGTTACCCTGCAATAAGTTTTGC

Function

symbol description
taldo1 Predicted to enable transaldolase activity. Predicted to be involved in pentose-phosphate shunt, non-oxidative branch. Predicted to act upstream of or within carbohydrate metabolic process and pentose-phosphate shunt. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in carbohydrate metabolic disorder. Orthologous to human TALDO1 (transaldolase 1).

NR:

description
PREDICTED: transaldolase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36613 False 501 lncRNA 0.38 2 15373495 15374091
TU36615 True 1686 lncRNA 0.49 9 15362034 15374091

Neighbor

gene id symbol gene type direction distance location
tspan4a tspan4,LOC102780031,LOC107381782 coding downstream 5975 15181720 ~ 15356059 (-)
LOC120556194 cd151,LOC104922780,LOC103368535 coding downstream 318152 15017564 ~ 15043882 (-)
LOC120556084 NA coding downstream 480895 14878022 ~ 14881139 (-)
nr1h3 nr1h3,LOC102777562 coding downstream 533639 14811445 ~ 14828395 (-)
madd madd coding downstream 557267 14740192 ~ 14804767 (-)
LOC120555953 LOC104955210,LOC103368874,LOC100700844,LOC104922787,LOC101483392 coding upstream 44861 15418952 ~ 15427599 (-)
LOC120556362 slc25a44,LOC104955209 coding upstream 59331 15433422 ~ 15437488 (-)
LOC120556400 rps17,LOC100699764,LOC107389132 coding upstream 150253 15524344 ~ 15532010 (-)
csnk1g1 csnk1g1,LOC103370372 coding upstream 162883 15536974 ~ 15578092 (-)
LOC120555812 snx1,LOC102784823 coding upstream 205949 15580040 ~ 15591856 (-)
G27497 NA non-coding downstream 181014 15180739 ~ 15181020 (-)
G27493 ddb1,LOC102208280,LOC106561926 non-coding downstream 207919 15149500 ~ 15154115 (-)
G27450 NA non-coding downstream 344546 15016590 ~ 15017488 (-)
G27441 NA non-coding downstream 408143 14953538 ~ 14953891 (-)
G27440 NA non-coding downstream 408690 14952685 ~ 14953344 (-)
G27545 psa4,psma4,LOC106562664 non-coding upstream 70235 15444326 ~ 15446509 (-)
G27551 rbpms2,LOC107381790,LOC104957780 non-coding upstream 101162 15475253 ~ 15482686 (-)
G27552 NA non-coding upstream 105215 15479306 ~ 15505668 (-)
G27554 NA non-coding upstream 109019 15483110 ~ 15486465 (-)
G27582 NA non-coding upstream 159909 15534000 ~ 15535337 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other downstream 283204 15050662 ~ 15078830 (-)
G27420 NA other downstream 518129 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 782023 14578027 ~ 14580011 (-)
G27321 NA other downstream 891689 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 2266268 13069996 ~ 13095766 (-)
LOC120556162 znf609 other upstream 697478 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 947872 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 1819422 17193513 ~ 17284509 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 2134032 17508123 ~ 17513168 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other upstream 2225659 17599750 ~ 17601390 (-)

Expression


Co-expression Network