G27552


Basic Information

Item Value
gene id G27552
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 15479306 ~ 15505668 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36690
ggacccaacaattccaataatttccccaagagcaagcatttagagAAACAATggagaggaaaaacttcctttaggcagaaacctcggacagacccaggctcttggtgagCGGACATCTGCCGGTGCCGGTTATGGGTATGTTGAACgttggcaattatagtaacaaagaTAACGGAACTaggactagaaataatagttgtagcagttcagggcgtagtaggatgtagcaggacgcTGAGCAGGAACACGCtggcagctgcaaccatgatttaggtgccaccctgaTCCAAGAAAGTGGAGAAAACACAGACTccagggaataagctccccagagccaTTAGTAACAATCATtactgggacatgaatgcacacagatgaaaacaggaaagaaaagctcagtgtgtcaaaggtaGTCCCCCAGCAGTCTAGACAATGTCAGTATAGTAGTCTTTTAAAAGGTCATATTTTGTCAAATAAGTCAGTATTTCGTAATGTCATAATTTATAGTTTGTCAAAATAAGTCAAAGCAGCTCAAAGTATGCCATACCAATTGtcatagtatgccataaaaggTCATAGGACACACGCAATCATCTTCGTTCACTCAAAAACGCCCGTTATAGTAATGACTGTCTGCATACTGCGTTGGTCAGTAGTATGCGCACGCTGTATGAAACAGTTATCAATTTGTTTTGAGTATGCTAGGCCAGGCTTAGCTAGTTTCTGGTTTTTCAGTTTCAGTACGTACTGCTTTGCTGAGGTTTTTGGAAGTTGAATAGTTTAAGGAATATTCCAGTTAAATTGCATCAACAATCTGGCTGCTATGATACACTTTAAGATTGTATTAAAACCCCTTTACACTGAGATATATGAAAGGGATTTGTCATTTGTTGATAAAGCACCTGAGACAGgaaatgcgcacacacacacaacccaatTTGTAGTAAACTGGCAAGAACTGGTACAGAAAGTATCACTGTAGTACTCATGGCTCATTGACCTGTAAAATTTCCTCTTTTAAGCACAAAGTTAATTTGCAGTCCCGTGTCTAGGTTGAGGAAATTGCTGGAATTTGTGGCCAATGTGATTTGAAAACTTAACTTGAAACATCATCCGCAATGAACTAATTCAGTGATGACTTAAGGTTAACGAAACTAGGATTTCCAAAATACTCCAAAGTACCACCCCTAAATTAATGAAGAGTCCAGACATGTCCAGTAATGCTTAAACACCTTTATTGTGCCCAATCTGAACATATTCCACAACTGCAAGTAGCAGCAAACTTGGCAGACCACAATGAGGTAGACTTTCAAAACTCTAAAAAGCAGCTGGGCTAAGGGACAACAAGCTCAGCATGACAAACgtaatggataaagaaaagacACTTGGTCTTTGGCACACAGCTTATTATGAGTTTATGTCCAACTGGAACAAGAAGGCAAAATGGGATTAAGAAAGCATGGAATCATTTACTGGGGTCTACTCAAGCTCTGGATAGATTAAGTTTATCGTCAGCTAAGTGGAAGTTCTTACATTCAACAGGAAACAAGCAGCTGTTCCAACATAGGCGTGTCCCCGTGCTGATGtacaaaagtgattaaaaaccaCTGCCACCTCTCCACACGTGCAAATTAAAAAGTGCAAAAATCAAACTTAGTACAACAAATGTTCATTCACTCTCTCAACAGGATCCATCAGGTGCTTGAGAAACGATGGATTGCCCAGTTGAAGTGTACAAATGTTACACATTTAATACAACTGGACCAACAAAGCAAGTTAAAGTAGTACTTCCAACATTTTGTGCCCATTTAGCTGAAACTTGGAAgggcaaattaaaaaaagaaaaagccacgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36690 True 1903 lncRNA 0.39 2 15479306 15505668

Neighbor

gene id symbol gene type direction distance location
LOC120556362 slc25a44,LOC104955209 coding downstream 41818 15433422 ~ 15437488 (-)
LOC120555953 LOC104955210,LOC103368874,LOC100700844,LOC104922787,LOC101483392 coding downstream 51707 15418952 ~ 15427599 (-)
tspan4a tspan4,LOC102780031,LOC107381782 coding downstream 123247 15181720 ~ 15356059 (-)
LOC120556194 cd151,LOC104922780,LOC103368535 coding downstream 435424 15017564 ~ 15043882 (-)
LOC120556084 NA coding downstream 598167 14878022 ~ 14881139 (-)
LOC120556400 rps17,LOC100699764,LOC107389132 coding upstream 18676 15524344 ~ 15532010 (-)
csnk1g1 csnk1g1,LOC103370372 coding upstream 31306 15536974 ~ 15578092 (-)
LOC120555812 snx1,LOC102784823 coding upstream 74372 15580040 ~ 15591856 (-)
neo1a NA coding upstream 94307 15599975 ~ 15787368 (-)
LOC120556584 NA coding upstream 134101 15639769 ~ 15639960 (-)
G27545 psa4,psma4,LOC106562664 non-coding downstream 32797 15444326 ~ 15446509 (-)
G27499 taldo1 non-coding downstream 105215 15362034 ~ 15374091 (-)
G27497 NA non-coding downstream 298286 15180739 ~ 15181020 (-)
G27493 ddb1,LOC102208280,LOC106561926 non-coding downstream 325191 15149500 ~ 15154115 (-)
G27450 NA non-coding downstream 461818 15016590 ~ 15017488 (-)
G27582 NA non-coding upstream 28332 15534000 ~ 15535337 (-)
G27587 NA non-coding upstream 40910 15546578 ~ 15546791 (-)
G27594 NA non-coding upstream 90945 15596613 ~ 15596867 (-)
LOC120555431 NA non-coding upstream 312942 15818610 ~ 15848699 (-)
G27659 NA non-coding upstream 523219 16028887 ~ 16029172 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other downstream 400476 15050662 ~ 15078830 (-)
G27420 NA other downstream 635401 14842713 ~ 14843905 (-)
LOC120556476 NA other downstream 899295 14578027 ~ 14580011 (-)
G27321 NA other downstream 1008961 14469758 ~ 14470345 (-)
G27075 LOC104939823,LOC100707594 other downstream 2383540 13069996 ~ 13095766 (-)
LOC120556162 znf609 other upstream 565901 16071569 ~ 16159882 (-)
LOC120555730 adamts7 other upstream 816295 16321963 ~ 16408868 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other upstream 1687845 17193513 ~ 17284509 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other upstream 2002455 17508123 ~ 17513168 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other upstream 2094082 17599750 ~ 17601390 (-)

Expression


Co-expression Network