G27672 (znf609)


Basic Information

Item Value
gene id G27672
gene name znf609
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 16081512 ~ 16081872 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU36851
GGGTAATTCGGCATCATGACTGCGGGCATGCCCCTGTATCCAGGGTGGTTGGGGTCATAGCCTTGTCCATAGGGGTAACCATGCATGTAGGGCATGTAGCCTTGGTGCTGTGCTAGTGGTGATGAGAACTGCATGTGTGGATTAGAACGAGAGTCTTTGCTCATGACCCGGTGGTCCTCAGAAGTGATTCTGGGATCACTACCCTCTTTGCCGTCCTCCTTGGGCCCACTTTGACTGTCCTTGGGCCGGGGCCTGTCATCCTTTAATTTACGATCCCGTTCCCGTTCTCGGTCCCTTTCATCTTTCCATCGAGGTTGTTGCTGCTGGTGTTCGTCTTCTGCTTGGGGTTTCTGGCTCTCGG

Function

symbol description
znf609 Predicted to enable promoter-specific chromatin binding activity. Involved in regulation of myoblast proliferation. Located in nucleoplasm.

NR:

description
PREDICTED: zinc finger protein 609 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36851 True 361 lncRNA 0.54 1 16081512 16081872

Neighbor

gene id symbol gene type direction distance location
senp8 senp8,LOC103374590,LOC103374606 coding upstream 59869 16018268 ~ 16021643 (+)
cpeb1b cpeb1 coding upstream 577062 15490399 ~ 15504450 (+)
LOC120555952 LOC103368873 coding upstream 662737 15393784 ~ 15418775 (+)
LOC120556051 NA coding upstream 689179 15374188 ~ 15392333 (+)
taldo1 taldo1,LOC102780893 coding upstream 707440 15362199 ~ 15374072 (+)
cln6a cln6,LOC100690854 coding downstream 219909 16301781 ~ 16312679 (+)
calml4a calml4 coding downstream 230851 16312723 ~ 16320946 (+)
LOC120556141 LOC104920616,LOC104955854,LOC103374661,LOC102791325,LOC102298654 coding downstream 329161 16411033 ~ 16412571 (+)
coro2ba coro2b coding downstream 413963 16495835 ~ 16544791 (+)
glceb glce coding downstream 499513 16581385 ~ 16642847 (+)
G27671 znf609 non-coding upstream 4106 16077018 ~ 16077406 (+)
G27663 gramd2 non-coding upstream 13087 16048879 ~ 16068425 (+)
G27632 myo9a non-coding upstream 185608 15892339 ~ 15895904 (+)
G27627 NA non-coding upstream 192689 15886918 ~ 15888823 (+)
G27613 NA non-coding upstream 262143 15818608 ~ 15819369 (+)
G27674 znf609 non-coding downstream 49309 16131181 ~ 16132039 (+)
G27675 NA non-coding downstream 77613 16159485 ~ 16159699 (+)
G27692 NA non-coding downstream 172451 16254323 ~ 16267657 (+)
G27703 NA non-coding downstream 217364 16299236 ~ 16299647 (+)
G27706 NA non-coding downstream 256515 16338387 ~ 16338772 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 595061 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 635020 15441455 ~ 15446492 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 1027890 15047877 ~ 15053622 (+)
kcna4 kcna4 other upstream 1116450 14889390 ~ 14965062 (+)
bbox1 bbox1,LOC102798250 other upstream 1346336 14708562 ~ 14735176 (+)
LOC120555788 NA other downstream 1642673 17724545 ~ 17743448 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 2480001 18561873 ~ 18575942 (+)
LOC120555697 NA other downstream 2992436 19074308 ~ 19087064 (+)
G28581 NA other downstream 3405374 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 3430484 19512356 ~ 19520218 (+)

Expression


Co-expression Network