G27977


Basic Information

Item Value
gene id G27977
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 17825864 ~ 17826910 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37215
tggcacatactaaggaaagctcattgcgggattggctctagtggctgtatttcaggaaatagacttcagatacagtattaggggaccactaaggcctatataaaagcatccaaagagaaccatgtcatgggacctttaacaaattGCCTGCATTAGTAGGTTGAATAGGCAAAGACTCACCACCAACATCAATAAAGTATTTCGCTGCCAGGCCAGACCTCGGTGCTGAGAATGACAAAACGGCATGAGACAGTTATGACATGTTGTTCTGCAACTGGTGTAACATAATCTTAGCGTGAATTCACGTGCACTGAAACCGTGTAATAGACCCAACAGGAAAAACATGTAATACCAGATACATCCATGGCCTCAGTATGTAAAACACTCACCGACTCTCCCATAGCAGCCATGTGGAACTGCTATCTGGATGTCTGTCTTCACAATCGTCTTATCTGTAGAGATCATATCCCGCTGCTTTAGTTGAGCCTCTGGTAGGTGTAGTGGCATGCTCAGACAGTTTTGCAAACTTGAGGACCGGTCTATCTTCTGcagtctttgtctctgtccttGCTCTCTTTGATGGAGAGATTGCAGATGCATCTGTGACTTCTAGGACGGGCATATTGGCAAATGTTTCACTGTTAAAAACCGATAGTGCACTAAATAATTTATACGGACTAAAGACAAACTATTTGCTAACCAGAGAGCGACAGAACTACAACCGACTACTGCAAGATTAAAAACTCGTCCTGGCTTCTGCGATCCCGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37215 True 770 lncRNA 0.44 2 17825864 17826910

Neighbor

gene id symbol gene type direction distance location
fbn1 fbn1,LOC102779271 coding upstream 2368 17762238 ~ 17823496 (+)
secisbp2l secisbp2l coding upstream 105607 17702303 ~ 17720257 (+)
cops2 cops2 coding upstream 123739 17695108 ~ 17702125 (+)
LOC120555872 LOC104951150,LOC103379093 coding upstream 201332 17609461 ~ 17624532 (+)
slc30a4 slc30a4 coding upstream 230703 17579315 ~ 17595161 (+)
myef2 myef2 coding downstream 27928 17854838 ~ 17870516 (+)
LOC120555992 NA coding downstream 59331 17886241 ~ 17888724 (+)
dmxl2 dmxl2 coding downstream 358991 18185901 ~ 18236296 (+)
LOC120555996 LOC104920192 coding downstream 421865 18248775 ~ 18252359 (+)
tnfaip8l3 tnfaip8l3 coding downstream 446778 18273688 ~ 18295514 (+)
G27895 NA non-coding upstream 330091 17494748 ~ 17495773 (+)
G27884 NA non-coding upstream 360220 17381379 ~ 17465644 (+)
G27879 NA non-coding upstream 511774 17313888 ~ 17314090 (+)
G27877 NA non-coding upstream 530913 17292715 ~ 17294951 (+)
G27840 NA non-coding upstream 653393 17172255 ~ 17172471 (+)
G28066 slc24a5,LOC102781271 non-coding downstream 44836 17871746 ~ 17876173 (+)
G28065 NA non-coding downstream 61851 17888761 ~ 17889217 (+)
G28083 NA non-coding downstream 91990 17918900 ~ 17919196 (+)
LOC120555993 NA non-coding downstream 177918 18004828 ~ 18181201 (+)
G28163 usp8,LOC102785891 non-coding downstream 617906 18444816 ~ 18445296 (+)
LOC120555788 NA other upstream 82416 17724545 ~ 17743448 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 2339413 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 2379372 15441455 ~ 15446492 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 2772242 15047877 ~ 15053622 (+)
kcna4 kcna4 other upstream 2860802 14889390 ~ 14965062 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 734963 18561873 ~ 18575942 (+)
LOC120555697 NA other downstream 1247398 19074308 ~ 19087064 (+)
G28581 NA other downstream 1660336 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 1685446 19512356 ~ 19520218 (+)
LOC120555792 pcdh9,LOC102784100 other downstream 1945209 19772119 ~ 19993954 (+)

Expression


Co-expression Network