G28083


Basic Information

Item Value
gene id G28083
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 17918900 ~ 17919196 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37361
ggaatgagtccttaccccaagtgaaggagttcaagtaccttggggttttgttcgcgagtgaggggacaatggagcgggagattggtcggagaatcggcgcagcgggtgcggtattacattccatctatcgcaccgttgtgacgaaaagagagctgagccagaaggcaaagctctcgatctaccggtcagttttcgttcctaccctcacctatggtcatgaaggctgggtcatgaccgaaagaacgagatccagggtgcaagcggccgaaatgggtttcctcaggagggtggctggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37361 True 297 lncRNA 0.55 1 17918900 17919196

Neighbor

gene id symbol gene type direction distance location
LOC120555992 NA coding upstream 30176 17886241 ~ 17888724 (+)
myef2 myef2 coding upstream 48384 17854838 ~ 17870516 (+)
fbn1 fbn1,LOC102779271 coding upstream 95404 17762238 ~ 17823496 (+)
secisbp2l secisbp2l coding upstream 198643 17702303 ~ 17720257 (+)
cops2 cops2 coding upstream 216775 17695108 ~ 17702125 (+)
dmxl2 dmxl2 coding downstream 266705 18185901 ~ 18236296 (+)
LOC120555996 LOC104920192 coding downstream 329579 18248775 ~ 18252359 (+)
tnfaip8l3 tnfaip8l3 coding downstream 354492 18273688 ~ 18295514 (+)
scg3 scg3 coding downstream 387249 18306445 ~ 18321304 (+)
leo1 leo1 coding downstream 442953 18362149 ~ 18380346 (+)
G28065 NA non-coding upstream 29683 17888761 ~ 17889217 (+)
G28066 slc24a5,LOC102781271 non-coding upstream 42727 17871746 ~ 17876173 (+)
G27977 NA non-coding upstream 91990 17825864 ~ 17826910 (+)
G27895 NA non-coding upstream 423127 17494748 ~ 17495773 (+)
G27884 NA non-coding upstream 453256 17381379 ~ 17465644 (+)
LOC120555993 NA non-coding downstream 85632 18004828 ~ 18181201 (+)
G28163 usp8,LOC102785891 non-coding downstream 525620 18444816 ~ 18445296 (+)
G28195 homer2 non-coding downstream 688109 18607305 ~ 18615809 (+)
LOC120556026 NA non-coding downstream 927073 18846269 ~ 18847406 (+)
G28393 NA non-coding downstream 1134928 19054124 ~ 19055004 (+)
LOC120555788 NA other upstream 175452 17724545 ~ 17743448 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 2432449 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 2472408 15441455 ~ 15446492 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 2865278 15047877 ~ 15053622 (+)
kcna4 kcna4 other upstream 2953838 14889390 ~ 14965062 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other downstream 642677 18561873 ~ 18575942 (+)
LOC120555697 NA other downstream 1155112 19074308 ~ 19087064 (+)
G28581 NA other downstream 1568050 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 1593160 19512356 ~ 19520218 (+)
LOC120555792 pcdh9,LOC102784100 other downstream 1852923 19772119 ~ 19993954 (+)

Expression


Co-expression Network