Item | Value |
---|---|
gene id | G28163 |
gene name | usp8,LOC102785891 |
gene type | non-coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053114.1 |
NCBI id | CM020911.1 |
chromosome length | 46923577 |
location | 18444816 ~ 18445296 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
symbol | description |
---|---|
usp8 | Predicted to enable thiol-dependent deubiquitinase. Acts upstream of or within regulation of cilium assembly. Predicted to be active in several cellular components, including dendritic spine; midbody; and postsynaptic density. Predicted to be extrinsic component of endosome membrane and extrinsic component of plasma membrane. Human ortholog(s) of this gene implicated in ACTH-secreting pituitary adenoma. Orthologous to human USP8 (ubiquitin specific peptidase 8). |
description |
---|
PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU37466 | True | 356 | lncRNA | 0.56 | 2 | 18444816 | 18445296 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC120555692 | LOC104956759 | coding | upstream | 5376 | 18433272 ~ 18439440 (+) |
mapk6 | mapk6 | coding | upstream | 25266 | 18403621 ~ 18419550 (+) |
leo1 | leo1 | coding | upstream | 64470 | 18362149 ~ 18380346 (+) |
scg3 | scg3 | coding | upstream | 123512 | 18306445 ~ 18321304 (+) |
tnfaip8l3 | tnfaip8l3 | coding | upstream | 149302 | 18273688 ~ 18295514 (+) |
hdc | hdc,LOC106587893,LOC103379072 | coding | downstream | 9360 | 18454656 ~ 18458552 (+) |
gatm | gatm,LOC102780634 | coding | downstream | 40766 | 18486062 ~ 18491068 (+) |
pde8a | pde8a,LOC100690151,LOC102210709,LOC101463592,LOC102780154 | coding | downstream | 60232 | 18505528 ~ 18557335 (+) |
LOC120555641 | whamm,LOC102778540 | coding | downstream | 140477 | 18585773 ~ 18604970 (+) |
LOC120555930 | NA | coding | downstream | 193986 | 18639282 ~ 18642799 (+) |
LOC120555993 | NA | non-coding | upstream | 263615 | 18004828 ~ 18181201 (+) |
G28083 | NA | non-coding | upstream | 525620 | 17918900 ~ 17919196 (+) |
G28065 | NA | non-coding | upstream | 555599 | 17888761 ~ 17889217 (+) |
G28066 | slc24a5,LOC102781271 | non-coding | upstream | 568643 | 17871746 ~ 17876173 (+) |
G27977 | NA | non-coding | upstream | 617906 | 17825864 ~ 17826910 (+) |
G28195 | homer2 | non-coding | downstream | 162009 | 18607305 ~ 18615809 (+) |
LOC120556026 | NA | non-coding | downstream | 400973 | 18846269 ~ 18847406 (+) |
G28393 | NA | non-coding | downstream | 608828 | 19054124 ~ 19055004 (+) |
G28394 | NA | non-coding | downstream | 612250 | 19057546 ~ 19057853 (+) |
G28396 | NA | non-coding | downstream | 626524 | 19071820 ~ 19072036 (+) |
LOC120555788 | NA | other | upstream | 701368 | 17724545 ~ 17743448 (+) |
LOC120556001 | rbpms2,LOC107381790,LOC103368877,LOC104957780 | other | upstream | 2958365 | 15475147 ~ 15486451 (+) |
LOC120556433 | psma4,psa4,LOC106562664 | other | upstream | 2998324 | 15441455 ~ 15446492 (+) |
LOC120556271 | tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 | other | upstream | 3391194 | 15047877 ~ 15053622 (+) |
kcna4 | kcna4 | other | upstream | 3479754 | 14889390 ~ 14965062 (+) |
LOC120556478 | LOC103360749,LOC104942123,LOC102301404 | other | downstream | 116577 | 18561873 ~ 18575942 (+) |
LOC120555697 | NA | other | downstream | 629012 | 19074308 ~ 19087064 (+) |
G28581 | NA | other | downstream | 1041950 | 19487246 ~ 19487533 (+) |
ercc3 | ercc3 | other | downstream | 1067060 | 19512356 ~ 19520218 (+) |
LOC120555792 | pcdh9,LOC102784100 | other | downstream | 1326823 | 19772119 ~ 19993954 (+) |