G28267


Basic Information

Item Value
gene id G28267
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18385531 ~ 18386608 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37601
CCAACTTCAATTTTATTCGACCAGGATAATGCACTCAAAGTCAATACTGTTTTTCAGGGATACATATTTTAAAACCAAACAATGAAATGCACGAAACAGTAACAACATATGCAGAATCTGTTGGTAGCGTCCAGATTTGAGACAATGACACTATAATAATGGGGGCTGTTCAAAGCTGCATTTTTGGCTGCAACTAAACACTGTTCAAAGTCATTCAACTTTATTGTAGAGATCCCAACCCAATTATCCAAAGACATCAAATATGTGAAATTTGGAGAAAAGAAATTGTATACAATTATGCATACAAGACACCTATACTATAGTCCCTTTCTGAccagagggatttttgcagttcctagaacatcaTGTTCCTTGAgccctttttttctcgtgttccgacttgaccaatttggggattattaagttcctctgaccgcagttcctgtaactctttcagctcctacttcagggcagggtcttttcccttttccttaTAGTGACCTAGGTCTACGTTGATTGGTCCAACTTATAAGTCACGCCCACTTTCAACCCGGCACTTGCACTCCCATCATATTAATTAGGATCATATTACGCTGGAGCCTTCgtcttctgtgtttctctgttaagTACTCCAGCCTAGTCTTTAAACGCCGCCGTTCGAACTCCGTTATGAGGATCCCGGCAAGGCACAACAGGAACATTCCCATGGCCTCCTCCATGCtggtttgttgttgtatgtGGTGCTAAAGTCAAGTGACGACGCTACaaagaccgttgccgtgcttgcgtcactcccttacccctcctaccagttcctatggccacttggccactgcgaatgcaaatggaaaaactggttttgggggagagtagctagtagaactgtttagaagtggactgttcctataactatgttcctataactacttggtcggaaagaggcttATCTGGTGGAATAGCACAGCCATAATCAGGCACTTTTTGACCTCTTACCCTTTGGAGGAAGGCTATAGAACTTGTAGGTCAATAACAATTTAGTAAGATTTGTGCATGGCTAATTGCAAAGTGCAAACATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37601 True 1078 lncRNA 0.42 1 18385531 18386608

Neighbor

gene id symbol gene type direction distance location
tmod2 tmod3,LOC102784726,LOC102314562 coding downstream 25321 18335550 ~ 18360210 (-)
lysmd2 lysmd2 coding downstream 57743 18321428 ~ 18327788 (-)
gldn gldn,LOC104962729 coding downstream 142521 18237855 ~ 18243010 (-)
sema6dl sema6d coding downstream 444059 17920329 ~ 17941472 (-)
slc24a5 slc24a5 coding downstream 506698 17871826 ~ 17878833 (-)
usp8 usp8,LOC102785891 coding upstream 52974 18439582 ~ 18451019 (-)
LOC120555694 LOC101077645 coding upstream 69942 18456550 ~ 18466081 (-)
LOC120556233 LOC104953026,LOC102209912,LOC102302305,LOC101469394 coding upstream 85106 18471714 ~ 18482023 (-)
LOC120555642 fsd2 coding upstream 188452 18575060 ~ 18584594 (-)
homer2 homer2 coding upstream 220861 18607469 ~ 18639221 (-)
G28264 NA non-coding downstream 3152 18381978 ~ 18382379 (-)
G28263 NA non-coding downstream 4009 18381179 ~ 18381522 (-)
LOC120555717 scg3 non-coding downstream 64926 18298911 ~ 18320605 (-)
G28094 NA non-coding downstream 428063 17957015 ~ 17957468 (-)
G28080 NA non-coding downstream 496323 17888834 ~ 17889208 (-)
G28284 NA non-coding upstream 83205 18469813 ~ 18471450 (-)
G28291 NA non-coding upstream 111241 18497849 ~ 18498089 (-)
G28302 pde8a,LOC104953025,LOC106596071,LOC108251619,LOC102210709 non-coding upstream 155850 18542458 ~ 18558219 (-)
G28309 NA non-coding upstream 181493 18568101 ~ 18569077 (-)
G28429 NA non-coding upstream 619300 19005908 ~ 19008421 (-)
G28265 NA other downstream 1889 18382705 ~ 18383642 (-)
G28121 NA other downstream 164981 18218122 ~ 18220550 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other downstream 784141 17599750 ~ 17601390 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other downstream 872363 17508123 ~ 17513168 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other downstream 1101022 17193513 ~ 17284509 (-)
G28269 mapk6 other upstream 29461 18416069 ~ 18420499 (-)
LOC120556268 btbd1 other upstream 263421 18650029 ~ 18658659 (-)
G28345 NA other upstream 332764 18719372 ~ 18720019 (-)
LOC120555695 NA other upstream 667483 19054091 ~ 19069996 (-)
LOC120555836 pcnp other upstream 736933 19123541 ~ 19126411 (-)

Expression


Co-expression Network