G28269 (mapk6)


Basic Information

Item Value
gene id G28269
gene name mapk6
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18416069 ~ 18420499 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37603
CATCTTTGCCAGTAATtttattttgagatattttgtAGAACAGGGGAACCAAtgattaccaaaaaaaaaaaataaaaaaaaaaaaaaagtccataaGTGTTCTACATGCTACACCTTACCTAATTCATCATGCTTGCCTGGAAAAAGTACATAgaaatttaacaaaacaaaaaaaacatacaattaaaaCTGACGTACATTATACTCACcattaactttacttttaatgtacCTCTCTCTTGCCTCCATGcacgcattttttttttttttttaaacattacatttagatAAAAAATTAAGACTTTTAGGCGCTTCTTCAAACCATAAAGCAGATTTTGCATTAAAGACAGAACGCacctataaataaaaaaaaacaaaacaaaaataatgatatCCATTTTGAAAATATCGGTGGAAAATGTAAAGCCTCAACTTCTTTTCGAACATAGATGAATTTGCAACCTACCATAAAACAGAAGAACACTTACGCCCATATAGTGCTGAAATGAAAATGGAAGTCCGTCCCAACTCCTCGATCATCGATAATCACATTGAAATAACACATTTTGATAAAATAAATAGCGCACATCTGCtagaaataaataatgattACTGAAACACCTCACTAATGTTAAATGCTAAAGTGAGACAGATTTCATCTGCGCGACCACTTCATTTCATGGAGAGAGGATGGTCATGTGTGTGTAAAGCACTAGTGCGGCTCCGAGTGTCTCTCGCGGCTGTTACCTTGAGGTAGATAACACATTTACATTAACGCCTACGATAATGGTTGCTGCTGGCATCATGTGTCAGATTACATTACAGTATGAAAGGGTTCAGGAAGCtttcttcagaaaaaaaaaaaaggacatcccaacccccttttttttttattcttcttcttcttttgtatCCCGTCCTAGGAAAAGCTGTTTCAATGCACTTAATAATGCCTACAGCAATGTCAGCGTCTAGCGTCCTTCCTTAGGTCACACCCTAACAGCCAAACCTCGTCTctcgaataaaaaaaaaacgcctcTCCTACCATCCGTCCATCTTTCGTCTAGTTACTTCTCTCCCGCCTTTCCGTTCGTATACAGTACATAAGTGTGCGAGTGACGTGCCAGTTCAGCAATGAGAGCGCAGCAGACGTTCACCCATGAAGGCCTGGTGGTCAAGGCTCAGAGTTAtgaccaacattttttttaaatataataaatcaCCCCTGTCAActcttaaaacaaaataattaaaagtaaccataataataaaaaaaaattatgaaatgaTTCAAGTTCAATAATATAccatattattaaaaaaaactgcctaGATTTTGCACTGTGAGggaggatatatatatttatttttaattaagatGCTTGAAGATGCTGCTGTATGTTTTGTGGGGAATCTGTGGGGAGCATTTGACAGCGCACGGGGTGAGGGACGCCTGGATGGATTTTAGAGGCAAGTCATCGGCGCCGTCAAAGCCAGGCAGGGCCAGAGAGTCCAGCTGCATGTTAAGCACGATCTCCGTGCTCCTGCAGAGGAAGCTGTCGTCCAGCTCTGTCCCCTCCGAGGGCTCCGTCTCCGAGCCGGCCACAGTCTCTCCGGCCCCGTCTTCCTTGCGGCTGAACAGGCGGTCCAGGTAGCTGGTGTAAGTGCTCTCCTTCTGGAGCTGGTCCTCTTTGTGAATGTCCCAGCATGCTTCGTCTATCAGACAGCCGTTCTCCCCGACTCGCTCCCCGGAGCCAAAGCTCTCCCAGGGGCGGGCGGGCCAGGCGCCGTCGCCGACGACGACTCCCAGCCCTCCTCCGCCTAACTGGGCCAGGTTCACCAGGcacttctcctccttctcctgaCTTATGGACTTGGACATGGAGCCCGAGCGGGGAGCCTCCAGCTGGGAAACCGAAGAGTTGAGCTCGTTGAGGAGGCCCACCTCGTGGAGCAGCGCCGCCTCCTGACAGGGCTCCGGCTGCAGGCTCAGTTTAATGGTGCTGGCGATGAAGGAGTCAAAGTCAAAGCCTTGGTTCTGCTGGCTTTGAGGCTTCTCCGTCTGATGCTTCTCCTGCTCGCTGTCCTTCTCCGCCGGACCCTGGGTCTTCTCGGCCTCCTGCAGCGCGATCTGGGCCTTCACCAGCCCGTTCTTCTCGCACTTGCTCTTGGCCTTGCGGTCCGCCTTCTCCTTGCTCTGCTGCTCCTTCCAGTTGGAGATGTCGATGATGAGCTTGGGCTCGTAGTAGTGGTTGACTTCGCTGTCCCTCCAGATGAGGTTGTCCAGGTAGGAGGGCGACACGGCCTTGTAGTTACAGGTGTGGCTACACTGCAAGTCACAGTATTTGTTCTCGTGGTGGTCGTCCTGCCAGGATTGCTCCGGCTGGAACAGAGTGGAGTAATCGAAGGACGGCTCGTCCAGGAACTCCCGATCTCCGTCAGCATATTTA
>TU37604
CATCTTTGCCAGTAATtttattttgagatattttgtAGAACAGGGGAACCAAtgattaccaaaaaaaaaaaaataaaaaaaaaataaaaaacacacctgAACCTCCTCCTTGTCTGTAACGTCAGAGAGAGCCCTTGGGTCAACCTGAACTTCGTCTGGGTCGTGGGTGCTGTGCAAGTGCCAGTCAGCCTCTGACAGCTGGCTCTCATGATATCTGTCCCAGGTGTGGCTGTGGCTCTGGTCCATGAGCAGGATATCATCTACTTCATCCTCAATGTGGAAGGGGTGCAGAGAGACAGGCTCGTCTAGGGGGAAGGAGTAGTCGGCCATATAGGGGTGGGCCAGGGCCTCCTCCGCAGTGAGGCGATCCATGGGGTTAAAGGTCAGGATCTTCTCCAGGAAGTCAAGGGCCTGGGGACTGACGTCAGGCAGCAGCTTAGCCAGCGGTGTGTGAGGCTTGGACATGTCGTTGCGGATGAAGACCGGGATGACGCTGTGGAGCTCCTGTCGGTCTTCCTCTCGCAGCACGGGGATGGACTCCAGGATCAGCTGCATCTGCTCCAGTTCGTGGGCCCTGCAAAGAGGGTTTTCCCTGTGAGCATCTCGGCAAAGATGCAGCCGGCGGCCCACATGTCGATGGCTTTGGTGTAGTTGtcaggagagagcagcaggcgAGGAGACCTGTACCACTTGGTGACCAGACCTTCAGAGAGATGACCCTGTGTTAGAAGGGGACACGGCGTCATTTAGTGGGACTCTTAGAGGAAGACGGTCAAAGGCTCTAAAATCTGTCGCTTCCCCTCAGTAATGGATACATGTGATTAACGTGG

Function

symbol description
mapk6 Predicted to enable MAP kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Is expressed in brain; otic vesicle; and pectoral fin. Orthologous to human MAPK6 (mitogen-activated protein kinase 6).

NR:

description
PREDICTED: mitogen-activated protein kinase 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37603 True 2450 TUCP 0.46 3 18417978 18420499
TU37604 False 830 lncRNA 0.53 5 18416069 18420499

Neighbor

gene id symbol gene type direction distance location
tmod2 tmod3,LOC102784726,LOC102314562 coding downstream 55859 18335550 ~ 18360210 (-)
lysmd2 lysmd2 coding downstream 88281 18321428 ~ 18327788 (-)
gldn gldn,LOC104962729 coding downstream 173059 18237855 ~ 18243010 (-)
sema6dl sema6d coding downstream 474597 17920329 ~ 17941472 (-)
slc24a5 slc24a5 coding downstream 537236 17871826 ~ 17878833 (-)
usp8 usp8,LOC102785891 coding upstream 19083 18439582 ~ 18451019 (-)
LOC120555694 LOC101077645 coding upstream 36051 18456550 ~ 18466081 (-)
LOC120556233 LOC104953026,LOC102209912,LOC102302305,LOC101469394 coding upstream 51215 18471714 ~ 18482023 (-)
LOC120555642 fsd2 coding upstream 154561 18575060 ~ 18584594 (-)
homer2 homer2 coding upstream 186970 18607469 ~ 18639221 (-)
G28267 NA non-coding downstream 29461 18385531 ~ 18386608 (-)
G28264 NA non-coding downstream 33690 18381978 ~ 18382379 (-)
G28263 NA non-coding downstream 34547 18381179 ~ 18381522 (-)
LOC120555717 scg3 non-coding downstream 95464 18298911 ~ 18320605 (-)
G28094 NA non-coding downstream 458601 17957015 ~ 17957468 (-)
G28284 NA non-coding upstream 49314 18469813 ~ 18471450 (-)
G28291 NA non-coding upstream 77350 18497849 ~ 18498089 (-)
G28302 pde8a,LOC104953025,LOC106596071,LOC108251619,LOC102210709 non-coding upstream 121959 18542458 ~ 18558219 (-)
G28309 NA non-coding upstream 147602 18568101 ~ 18569077 (-)
G28429 NA non-coding upstream 585409 19005908 ~ 19008421 (-)
G28265 NA other downstream 32427 18382705 ~ 18383642 (-)
G28121 NA other downstream 195519 18218122 ~ 18220550 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other downstream 814679 17599750 ~ 17601390 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other downstream 902901 17508123 ~ 17513168 (-)
LOC120556401 LOC104927750,LOC104949847,LOC103353195 other downstream 1131560 17193513 ~ 17284509 (-)
LOC120556268 btbd1 other upstream 229530 18650029 ~ 18658659 (-)
G28345 NA other upstream 298873 18719372 ~ 18720019 (-)
LOC120555695 NA other upstream 633592 19054091 ~ 19069996 (-)
LOC120555836 pcnp other upstream 703042 19123541 ~ 19126411 (-)
LOC120555658 NA other upstream 3159469 21579968 ~ 21583558 (-)

Expression


Co-expression Network