G28309


Basic Information

Item Value
gene id G28309
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 18568101 ~ 18569077 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37650
aaaacGGCTTTGTAAGCAGATGCAGAAATCCAAGGCTTTTCCCTTTAGCCAGGGACGTTCTCGCTGCTACTTAATTTGGGAGGTGGGTATCAGTGCAGGCAACATGGTCTTCATTTGCCTCACTTTCTTAACCTCCATTTGTAAAATCCTGACTCCTGACTGACACAGACAATCAACATTCAACGCAAAAGACCTGAGCTGCATAATGAATTGTTTAcaatatctttttaataaaaaaaaggttgaggGAAAAAAGCACATTCAGAGCATTACCCTTTTTTTTGCCAACACTAAATagcaaacaaaagccagacattATCtcgtattaagttgctgtgggCAAACTGGGCttttcgggaggggggcttaaagagacaggcactcCAACAGAGGatctcagacagagggtgaatacaggtgcagcagccatgggcagtatgagaaaaatacgTTGTTTAAGgttatgtaaacatgttctagttgAAACACGAAATACATGAACCTGAAAACAGTAGGGTTCATAATTGTACAGGTTTCACCACCATTTTAGAGGGGTGAACTTCAACATAGACGTCATGTCTTGCCTACCCCTGAATGAGGAGCTGCAGGCCGATGTCCTGGCACTGAGGTTGTGTTGGGCATCCGTGGCACGGGTGGGGTAATGACAGGCCGAGGAGGCTGAGGGTAGAGTGTGAGCGGAGGCATTACAGGCATCTGCTGTCCTGATGCTGCGGAGGCCCTCAACAGGTCTTCAGAGATGATCTCCTTTATCCTCAGCACAGCCTCTGATTTTGCAGAAAGGTTATTGACCTGCCCATGGTTCTTTCCATGGACATGCAAATACAAAGGTCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37650 True 855 lncRNA 0.45 2 18568101 18569077

Neighbor

gene id symbol gene type direction distance location
LOC120556233 LOC104953026,LOC102209912,LOC102302305,LOC101469394 coding downstream 86078 18471714 ~ 18482023 (-)
LOC120555694 LOC101077645 coding downstream 102020 18456550 ~ 18466081 (-)
usp8 usp8,LOC102785891 coding downstream 117082 18439582 ~ 18451019 (-)
tmod2 tmod3,LOC102784726,LOC102314562 coding downstream 207891 18335550 ~ 18360210 (-)
lysmd2 lysmd2 coding downstream 240313 18321428 ~ 18327788 (-)
LOC120555642 fsd2 coding upstream 5983 18575060 ~ 18584594 (-)
homer2 homer2 coding upstream 38392 18607469 ~ 18639221 (-)
ap1s2 ap1s2,LOC101078094,LOC107095773,LOC103463884,LOC101477195 coding upstream 102275 18671352 ~ 18676489 (-)
LOC120556226 LOC103360767 coding upstream 130268 18699345 ~ 18705558 (-)
ppef1 NA coding upstream 137213 18706290 ~ 18718603 (-)
G28302 pde8a,LOC104953025,LOC106596071,LOC108251619,LOC102210709 non-coding downstream 9882 18542458 ~ 18558219 (-)
G28291 NA non-coding downstream 70012 18497849 ~ 18498089 (-)
G28284 NA non-coding downstream 96651 18469813 ~ 18471450 (-)
G28267 NA non-coding downstream 181493 18385531 ~ 18386608 (-)
G28264 NA non-coding downstream 185722 18381978 ~ 18382379 (-)
G28429 NA non-coding upstream 436831 19005908 ~ 19008421 (-)
G28437 NA non-coding upstream 467771 19036848 ~ 19037059 (-)
G28438 NA non-coding upstream 484247 19053324 ~ 19053869 (-)
G28442 NA non-coding upstream 494251 19063328 ~ 19063839 (-)
G28447 NA non-coding upstream 515225 19084302 ~ 19087065 (-)
G28269 mapk6 other downstream 147602 18416069 ~ 18420499 (-)
G28265 NA other downstream 184459 18382705 ~ 18383642 (-)
G28121 NA other downstream 347551 18218122 ~ 18220550 (-)
c3h15orf48 clg1h15orf48,csgr07h15orf48,LOC103353210,LOC107085327,LOC104951152 other downstream 966711 17599750 ~ 17601390 (-)
G27925 LOC103353204,LOC106512954,LOC102223374,LOC104951141 other downstream 1054933 17508123 ~ 17513168 (-)
LOC120556268 btbd1 other upstream 80952 18650029 ~ 18658659 (-)
G28345 NA other upstream 150295 18719372 ~ 18720019 (-)
LOC120555695 NA other upstream 485014 19054091 ~ 19069996 (-)
LOC120555836 pcnp other upstream 554464 19123541 ~ 19126411 (-)
LOC120555658 NA other upstream 3010891 21579968 ~ 21583558 (-)

Expression


Co-expression Network