G28394


Basic Information

Item Value
gene id G28394
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19057546 ~ 19057853 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37775
CTCAGGAAGTGCCTCTCCTCGTCCTCTCGCTGGTGTTTGAGCTTCACACTACGACTCCACTCGTCCTCCAGTGACTTACTGATGTCCTGCTTCTTCTCAAAGCGACTAATGCGGTCCAATATTAACCTGGACAGAAAACATACCACAGAAAGTTtccacaaaaagaaaacatttttggaCTAAGGTTTTCCTTTACTCACtccattttgttgtgtttgagaacttctctctctttctccagctGTTCTCGGCGGTTGTGCAgttcttctttcttcctctgaGTGGCAGCGTTGCAATTTACCTGGAAG

Function

NR:

description
PREDICTED: poly [ADP-ribose] polymerase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37775 True 308 lncRNA 0.45 1 19057546 19057853

Neighbor

gene id symbol gene type direction distance location
tmem39a tmem39a coding upstream 33574 19010477 ~ 19023972 (+)
LOC120556409 LOC104967794 coding upstream 49160 18999528 ~ 19008386 (+)
LOC120555986 LOC103365180,LOC104967792 coding upstream 62268 18970586 ~ 18995278 (+)
LOC120555985 NA coding upstream 88068 18958969 ~ 18969478 (+)
vegfd vegfd coding upstream 123722 18926038 ~ 18933824 (+)
LOC120555696 NA coding downstream 46413 19104266 ~ 19109063 (+)
LOC120555834 NA coding downstream 56113 19113966 ~ 19123540 (+)
stk16 stk16 coding downstream 69027 19126880 ~ 19132812 (+)
mnx2b LOC103365191,LOC104967070 coding downstream 106741 19164594 ~ 19168813 (+)
atic atic,LOC103365192,LOC102792413 coding downstream 116339 19174192 ~ 19181908 (+)
G28393 NA non-coding upstream 2542 19054124 ~ 19055004 (+)
LOC120556026 NA non-coding upstream 210140 18846269 ~ 18847406 (+)
G28195 homer2 non-coding upstream 441737 18607305 ~ 18615809 (+)
G28163 usp8,LOC102785891 non-coding upstream 612250 18444816 ~ 18445296 (+)
LOC120555993 NA non-coding upstream 876345 18004828 ~ 18181201 (+)
G28396 NA non-coding downstream 13967 19071820 ~ 19072036 (+)
LOC120555698 NA non-coding downstream 29342 19087195 ~ 19091823 (+)
G28398 NA non-coding downstream 36832 19094685 ~ 19094900 (+)
G28405 NA non-coding downstream 42566 19100419 ~ 19100639 (+)
G28406 NA non-coding downstream 43200 19101053 ~ 19101789 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other upstream 481604 18561873 ~ 18575942 (+)
LOC120555788 NA other upstream 1314098 17724545 ~ 17743448 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 3571095 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 3611054 15441455 ~ 15446492 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 4003924 15047877 ~ 15053622 (+)
LOC120555697 NA other downstream 16455 19074308 ~ 19087064 (+)
G28581 NA other downstream 429393 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 454503 19512356 ~ 19520218 (+)
LOC120555792 pcdh9,LOC102784100 other downstream 714266 19772119 ~ 19993954 (+)
G28770 NA other downstream 1653251 20711104 ~ 20761147 (+)

Expression


Co-expression Network