G28396


Basic Information

Item Value
gene id G28396
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19071820 ~ 19072036 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37777
CAAATAGAAGTTTATCAAAGCTTCGAGGGTCAAAATTTCCAATATATGAACTTCTGAGTTGTGATGCTTGTGAATGTGCTGTACGGCTTATTTATTACAGTAGGACAATTTTATTATACCAGTCATACAACAAACATTGATTGTGGTAACAAACTACAATCTATAAAATCTTCAGATACCTTGTCAGTGACAACATACCAGTATTTGGGCAGCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37777 True 217 lncRNA 0.35 1 19071820 19072036

Neighbor

gene id symbol gene type direction distance location
tmem39a tmem39a coding upstream 47848 19010477 ~ 19023972 (+)
LOC120556409 LOC104967794 coding upstream 63434 18999528 ~ 19008386 (+)
LOC120555986 LOC103365180,LOC104967792 coding upstream 76542 18970586 ~ 18995278 (+)
LOC120555985 NA coding upstream 102342 18958969 ~ 18969478 (+)
vegfd vegfd coding upstream 137996 18926038 ~ 18933824 (+)
LOC120555696 NA coding downstream 32230 19104266 ~ 19109063 (+)
LOC120555834 NA coding downstream 41930 19113966 ~ 19123540 (+)
stk16 stk16 coding downstream 54844 19126880 ~ 19132812 (+)
mnx2b LOC103365191,LOC104967070 coding downstream 92558 19164594 ~ 19168813 (+)
atic atic,LOC103365192,LOC102792413 coding downstream 102156 19174192 ~ 19181908 (+)
G28394 NA non-coding upstream 13967 19057546 ~ 19057853 (+)
G28393 NA non-coding upstream 16816 19054124 ~ 19055004 (+)
LOC120556026 NA non-coding upstream 224414 18846269 ~ 18847406 (+)
G28195 homer2 non-coding upstream 456011 18607305 ~ 18615809 (+)
G28163 usp8,LOC102785891 non-coding upstream 626524 18444816 ~ 18445296 (+)
LOC120555698 NA non-coding downstream 15159 19087195 ~ 19091823 (+)
G28398 NA non-coding downstream 22649 19094685 ~ 19094900 (+)
G28405 NA non-coding downstream 28383 19100419 ~ 19100639 (+)
G28406 NA non-coding downstream 29017 19101053 ~ 19101789 (+)
G28407 NA non-coding downstream 30681 19102717 ~ 19103075 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other upstream 495878 18561873 ~ 18575942 (+)
LOC120555788 NA other upstream 1328372 17724545 ~ 17743448 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 3585369 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 3625328 15441455 ~ 15446492 (+)
LOC120556271 tmem138,LOC104922799,LOC102296598,LOC102204478,LOC104956289,LOC103368539,LOC102790175,LOC102222702 other upstream 4018198 15047877 ~ 15053622 (+)
LOC120555697 NA other downstream 2272 19074308 ~ 19087064 (+)
G28581 NA other downstream 415210 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 440320 19512356 ~ 19520218 (+)
LOC120555792 pcdh9,LOC102784100 other downstream 700083 19772119 ~ 19993954 (+)
G28770 NA other downstream 1639068 20711104 ~ 20761147 (+)

Expression


Co-expression Network