G28429


Basic Information

Item Value
gene id G28429
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19005908 ~ 19008421 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37814
GACtgtaaagtgtaaaaacaaagaaatacaaatcCTTAAAAACAATGGAAAAGTCAACAACTTTAATTCCATGTGTAACTGATTATAGGTGTATTTCTAAATGATATGCAAAAGGAAGGGACAAAGAAACTAGGTGTTTCCAGAACTGTACACTGAGAATAATAGTATAACATTTTCATATGGTGCTGACAACtgtaatttaaatgaaaaaacaacaactttttggGCCTGTAACAATAGTTCACATTACTTCATATCCTACATCAACACCATGTAAATGACTTATTTACATGCAGATTTTTTATAAGTGATACTTAATTTTATATACAAAAGTTTCAAAAAAGACTAATATTATCTAAACAGAGTGCAATACACCTTTTCCTTCACAAAATtagtaaaaacaaatacacaggTCACTTCAAGACATCCAGGAGATATGAAAAAtaaccagtgtttcccacacagactaatgtgtggcggtgcacctcactatcaacaccggccgccgcgcattgcgtttcgttattaatttctttttttttatataaataatgttatgtcatttttttactcttacactgaatgtgttccacgactgaaaaaggcacgtgttgaggatgaggaccagcctgaaccggaggtatctgTCTGAAATGGCGCTGAACAGTCCGACCactgtaattagttatgttattaatttgtttacaatattttccggcttcaaccagtgaaagacggGGTCAGGGAGATAAAGAGATAGATtcgttaggcattgaagtaggaTAGGAGGACAGCATCTAACAGCGTGTCTGAAAATAAGTATAAGTATtccttcccccacccccccggTGACACGGTGCAACACCCCACAAATAGCTTTCtattctgtgggaaacactgataaCCATTTACAAAAATAATATAGCTTAAAACTAATTCCAGCATCCACAATAGTctattcatatttatgtaggTTTATATAGTTCTAATGTAAGAATTGTAATTTGCTTATAGTTACTGGCCCTGAGCATAATTTCTTTGGCACGTAATGTTTTATGGCTTTATCAAATATAAGAACTAACTGTGTTCCTGCCAAGCGAATATGTTTTAAGAGGAGAAACATCCATTAAAGCcacatataaaaaataatctaaCATGAGGCTTTTAGTCCAAATCTACTGTAATTTCCATTACACTGATAAACCAGTAGAGGGAAACATTATTTCAAAAATTCCCCCTTTAGTAGAAGACCTGCATAGTTTTCttaaaacaatatttaaaaacaaaaacaaatgaggaGCTACTAAATAAGTTTCTTTACTGACATCGAACATTTTCTTTAGCACATGCACACTTTGAGAAGGAGGATTATTGCCAATCTCGAGATTGTAAATCGCACATTTTATGAATACTTCTGCATATCAAGacggtgataaaaaaaaagttgattcatgattcatttaaaaacataacaaaacattgATATTTAAAAGTTTACCAGTAGCCATACAACAAGGCTCCCAGATCTAGTGAGGTGTGCTTGTTCTCTGAAACAGAGGTCGCAGGGCGTTCAGCTGGAGGGCTCAGATGACGACGCTGGTGCCACTGCGAGAACTCTTGTCCTGAGAGACACATACTGACTTTAGATCACTTCATTCGCAATCAACataattcagacttttttttttttttagaatgatTTGTGTGATTGAATGATTGTGTGGGTTTGTCTTTGGCGTAagtgcgttggtgtgtgtgtgtctatcaaCTAAAGCATTGTGTGTCTTACAGAGTAGTGTTCAATCCTCCGTGATCCTggtttctttcctggttcgtaCTCCCTGTAGCTCGGAGGATTTTCAACCCAGCCTCCACCTCCTctcgtccctcctcctctcctgctgCTGCCTTCATCATCCGAGCTCCAGGACCCTCTTCTGGAGCGCTGCGATGCTGGGGGAGAGTAGTTTCCTCTGGACCTGCTGTCAAACAGGTCATCCCTGGAGCGGGAGCGGGGGCGGTCCATGCCTCCTCGTGGCCCGCTGTGACTGCGCCCGTCCAGGGAGTCCTGGCTGTAGCTCCTGGGAACACCTCTAGAACGCGTGGGTGAGGGCTGGCGCCTGCCTGCTGATCCTCGGTCGTCACGACGGCCAAAGCCGCTGCGGCTGCTCTCGCTGGAGCTCGGGGGCCGAGTCTTGGGTGCAGAAGGTTGGATTCTGACCTGCTGCTCTCTTATTGGTGGAAGTGTGATGACACGGCGCTCTGTTGGGCCCTCATCAAGGGCAGAGATCATGCTGGGAGGGCCGGGGGAAAATGGGATGGTCATGGGCCTCTGCTGTAGTGGTGGCATCTGCTGCATGTGGTGGGGTGGAGGAGGCATCTGCTGCATGTGGTGGGGTGGAGGAGGCATCTGCTGCATGTGGTGGGGTGGAGGAGGCTGGGACTGACGTAAAGAAGACACCAGaagaaaatacaaatgaaaacCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37814 True 2487 lncRNA 0.42 2 19005908 19008421

Neighbor

gene id symbol gene type direction distance location
grpr grpr,LOC103365195 coding downstream 55638 18942607 ~ 18950270 (-)
LOC120556456 NA coding downstream 108211 18890562 ~ 18897697 (-)
nhsb nhs,LOC101481021,LOC104963549,LOC100699658,LOC102307289 coding downstream 137222 18800847 ~ 18868686 (-)
cdkl5 LOC106914639,LOC103143564,LOC106952012,LOC105934466,LOC101067260,LOC102215627 coding downstream 238189 18728776 ~ 18767719 (-)
ppef1 NA coding downstream 287305 18706290 ~ 18718603 (-)
LOC120555913 prss23,LOC103365183,LOC104967790 coding upstream 17477 19025898 ~ 19029237 (-)
fn1b fn1,LOC103359471 coding upstream 174107 19182528 ~ 19207643 (-)
psmd14 psmd14,psde,LOC107563735 coding upstream 219218 19227639 ~ 19232840 (-)
marchf7 LOC104963329 coding upstream 335003 19343424 ~ 19358367 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding upstream 450750 19459171 ~ 19495413 (-)
G28309 NA non-coding downstream 436831 18568101 ~ 18569077 (-)
G28302 pde8a,LOC104953025,LOC106596071,LOC108251619,LOC102210709 non-coding downstream 447689 18542458 ~ 18558219 (-)
G28291 NA non-coding downstream 507819 18497849 ~ 18498089 (-)
G28284 NA non-coding downstream 534458 18469813 ~ 18471450 (-)
G28267 NA non-coding downstream 619300 18385531 ~ 18386608 (-)
G28437 NA non-coding upstream 28427 19036848 ~ 19037059 (-)
G28438 NA non-coding upstream 44903 19053324 ~ 19053869 (-)
G28442 NA non-coding upstream 54907 19063328 ~ 19063839 (-)
G28447 NA non-coding upstream 75881 19084302 ~ 19087065 (-)
G28456 NA non-coding upstream 101966 19110387 ~ 19111769 (-)
G28345 NA other downstream 285889 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 347249 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 585409 18416069 ~ 18420499 (-)
G28265 NA other downstream 622266 18382705 ~ 18383642 (-)
G28121 NA other downstream 785358 18218122 ~ 18220550 (-)
LOC120555695 NA other upstream 45670 19054091 ~ 19069996 (-)
LOC120555836 pcnp other upstream 115120 19123541 ~ 19126411 (-)
LOC120555658 NA other upstream 2571547 21579968 ~ 21583558 (-)
G28933 NA other upstream 2572621 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 2878167 21886588 ~ 22051625 (-)

Expression


Co-expression Network