G28460


Basic Information

Item Value
gene id G28460
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19120951 ~ 19122762 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37852
atacatttttcaccagtggccctaatcctcttccgtagttAACCACTTAACCCATTTTATACAGATTTTCCTACTACAGCattgtcaaactcattttcactaagggccacactggaaaaagaaaattacaccaagggccagacatgtttattgacgtgcttttgttattgcatgtcactttttaaaaacattttggtagcgTTTtacctcatttttgttgtttttgttgcgacttttttgtggctttctcagacatttgttacctttttgtaaatttgttgctttttctgacatttttgtacgcttttttttttttttttaacaacctgtttcacagcctgaatatgaaaactctgcttctgggggaatttctgagtctcagagacACTTTCCTGTGCttttggtttggtgcacaactaggcgggccaaaatttattgtgaacccaaattgatatacgggccggatctaaatctgtaACAGGCggaccttgagtttgacacgtgtccTACCATCAACGCAGCAATGGGTTTCAGTTGATGTCAGTAAATCGATAAAATGAAACCAATGTGGCTATTTGAGAATTGCATGGGGGGGGGGCACAAAGATACTGGAATGAATCGGGTAGATGCAAAGACTGTGAGTCAAGCCAAAACATCTTGATTGCCCTCTGGTGGttggctgcagtataggtcaaATCTCACCCCCTCCATGTTGGTTGATGTGACATGGGCCACACTAAAAAGTGAAAGTACACTTCAAATACATTTTCCCAAAGATGGCTTTGGTAATTTTAGGTAGTTcttatcacgctgatgtttgttcaaTGGTTAATTGTGATAAGTTtggttttatgtttaaaaaaacctgggtgaaacgtcatgattgacagctgtgattgactcgtGTTTTGTCAGGTGGGTGTATGGATGGGACTTTGATACAGCAGTTCCACTGGGGGATCACTACTGCGCAGACTCTATTTCCAAAATTACATCCGGTACATTACAAGTATCCGCTATACTTTGGCTTAACTTTTGTgtagtgggaggaagtggagacgcgTTGTACATCTTTTCTCACAGTCTATGGAATGAATAGCCGTGGTTGCGGGGAGGGGCCTATAGAGAATGCCTGTGTACAGggtccagaattttgtgctacgtcCCTGTGAACGCGGCATTAGACATCTTCTCTCTGGGAAATGTAGGCCTACCTGGATTCCCGATTCCAGTACAAACACAGCATTGCTGTTGGAGAGGTAGTCAGCTGACAGGAGACAGATAAGCATTCGGCTTCTCTGCATTGCAAGGACCACATCATTTGCATATGCTGCAATACAAAATGGAAACCATCAGGAACATTTGCTgccaacacacagagacgcagacATACAGTTGATCCTCTGACCTCCTCCAGGAAGCACGTCCCTCTCCAGAAGACAGAGGCGATATGCCCACCGGTCCTCTAACACATGGGGTAGCAGCACTTCTAGTGGTCTCTGGGTTGAGGTACCCTCCTCAGTGTTCAGCGGGTCCATGCTGGACAAACATGCTGCCAATGAAAGCATTTTGTCAATTTACTTTACCAGTGTAGTTGCatgaaaataaaatccagaTATCATACATTAAATGTGTTGGCCTACCTTCCTCATCTGTGTCAGGTCCTTTCTGGGTGGAAATGGTCAAAACGCCCTCAACCTCAGCTGTTGGAGGGCTCCACACATACGACAGAAGCACATCAAACTCTTTCTTATCTGATTGGTGGAGGTGGATGTGAAAGACAATTTTGAAACGTAAACATTAGGTTCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37852 True 1812 lncRNA 0.43 1 19120951 19122762

Neighbor

gene id symbol gene type direction distance location
LOC120555913 prss23,LOC103365183,LOC104967790 coding downstream 91714 19025898 ~ 19029237 (-)
grpr grpr,LOC103365195 coding downstream 170681 18942607 ~ 18950270 (-)
LOC120556456 NA coding downstream 223254 18890562 ~ 18897697 (-)
nhsb nhs,LOC101481021,LOC104963549,LOC100699658,LOC102307289 coding downstream 252265 18800847 ~ 18868686 (-)
cdkl5 LOC106914639,LOC103143564,LOC106952012,LOC105934466,LOC101067260,LOC102215627 coding downstream 353232 18728776 ~ 18767719 (-)
fn1b fn1,LOC103359471 coding upstream 59766 19182528 ~ 19207643 (-)
psmd14 psmd14,psde,LOC107563735 coding upstream 104877 19227639 ~ 19232840 (-)
marchf7 LOC104963329 coding upstream 220662 19343424 ~ 19358367 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding upstream 336409 19459171 ~ 19495413 (-)
gtf2f2a gtf2f2 coding upstream 377767 19500529 ~ 19508532 (-)
G28457 NA non-coding downstream 4547 19115987 ~ 19116404 (-)
G28456 NA non-coding downstream 9182 19110387 ~ 19111769 (-)
G28447 NA non-coding downstream 33886 19084302 ~ 19087065 (-)
G28442 NA non-coding downstream 57112 19063328 ~ 19063839 (-)
G28438 NA non-coding downstream 67082 19053324 ~ 19053869 (-)
G28464 NA non-coding upstream 12976 19135738 ~ 19136610 (-)
G28495 NA non-coding upstream 103370 19226132 ~ 19227494 (-)
G28516 NA non-coding upstream 170212 19292974 ~ 19294310 (-)
G28545 NA non-coding upstream 207728 19330490 ~ 19331515 (-)
G28552 NA non-coding upstream 229235 19351997 ~ 19409502 (-)
LOC120555695 NA other downstream 50955 19054091 ~ 19069996 (-)
G28345 NA other downstream 400932 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 462292 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 700452 18416069 ~ 18420499 (-)
G28265 NA other downstream 737309 18382705 ~ 18383642 (-)
LOC120555836 pcnp other upstream 779 19123541 ~ 19126411 (-)
LOC120555658 NA other upstream 2457206 21579968 ~ 21583558 (-)
G28933 NA other upstream 2458280 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 2763826 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 3148108 22270870 ~ 22336817 (-)

Expression


Co-expression Network