G28526


Basic Information

Item Value
gene id G28526
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19323032 ~ 19344125 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU37927
GCACAACACACcagtttgcATTTAATCTTTATTTCCAAAATTGAAAGCATGAAACTAGATTTGTACATACATAAAGCATTTCAAACACTGAAACAAAGAACGTGTGTTGATGGGgttatgttctttttttttttccttttctttctcagtggGAAAAGTCAGAGGAAACACCAAAAGGAATAATCACCACTTTGTATATTCTCTCCTAAAAGCATCCATCTTACCATCACACACAAGTACTAATCGACACTTACTGTCCTATGCTATTTCCAATTCCTGCCTTTTCATTCAAACATTAAAGCACTTGTGGTGTAACAGTTAAAAAGActtgcatttttatttaattataattgaataAAGTGCACTctcatgaggaaaaaaaaaaaaatgaccgtTGTGTCAACCAAAATATTTTTACGCACTAGTTCATTTCGagtttgcatatctgcaaaagCCACCTGCAACAAAGGCGAGACGCGTTGTGTGCACTGCCGTTCAATTTCTGATGAACGTGACGATGTCAAAAGCATGTGTGAAAACTGGGTGAGCTACCATATGGCATCGAGTGACCCaccttctttttatttttatttttttacccatAATCCACCCCTTTCACATAATTAGTACTCCTCTTCGAGATCATCGTCCAGGTCAGAAAAGTCAATAGATGGTCTGTTGTCTCGCGTGTCCTCGTCACCTTCCCCATGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37927 True 712 lncRNA 0.38 2 19323032 19344125

Neighbor

gene id symbol gene type direction distance location
pla2r1 pla2r1 coding upstream 17120 19277153 ~ 19305912 (+)
itgb6 itgb6 coding upstream 47227 19261291 ~ 19275805 (+)
rbms1a LOC104918252,LOC103359468,LOC103143540 coding upstream 66903 19237245 ~ 19256129 (+)
atic atic,LOC103365192,LOC102792413 coding upstream 141124 19174192 ~ 19181908 (+)
mnx2b LOC103365191,LOC104967070 coding upstream 154219 19164594 ~ 19168813 (+)
baz2ba baz2b coding downstream 29856 19373981 ~ 19444669 (+)
wdsub1 wdsub1 coding downstream 102045 19446170 ~ 19458999 (+)
LOC120556555 LOC103359454,LOC102294290 coding downstream 183960 19528085 ~ 19533813 (+)
LOC120556547 LOC103359454,LOC102294290,LOC100700192 coding downstream 191572 19535697 ~ 19545656 (+)
rbm26 rbm26 coding downstream 205229 19549354 ~ 19561725 (+)
G28492 psmd14,LOC107563735 non-coding upstream 92404 19229955 ~ 19230628 (+)
G28479 LOC103359471 non-coding upstream 124805 19196746 ~ 19198227 (+)
G28474 LOC103359471 non-coding upstream 129767 19191772 ~ 19193265 (+)
G28473 LOC103359471 non-coding upstream 131870 19190118 ~ 19191162 (+)
G28465 NA non-coding upstream 166219 19156597 ~ 19156813 (+)
G28571 NA non-coding downstream 120085 19464210 ~ 19464532 (+)
G28572 NA non-coding downstream 120925 19465050 ~ 19465340 (+)
G28573 NA non-coding downstream 122187 19466312 ~ 19466524 (+)
G28574 NA non-coding downstream 122503 19466628 ~ 19468243 (+)
G28575 NA non-coding downstream 124179 19468304 ~ 19468663 (+)
LOC120555697 NA other upstream 235968 19074308 ~ 19087064 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other upstream 747090 18561873 ~ 18575942 (+)
LOC120555788 NA other upstream 1579584 17724545 ~ 17743448 (+)
LOC120556001 rbpms2,LOC107381790,LOC103368877,LOC104957780 other upstream 3836581 15475147 ~ 15486451 (+)
LOC120556433 psma4,psa4,LOC106562664 other upstream 3876540 15441455 ~ 15446492 (+)
G28581 NA other downstream 143121 19487246 ~ 19487533 (+)
ercc3 ercc3 other downstream 168231 19512356 ~ 19520218 (+)
LOC120555792 pcdh9,LOC102784100 other downstream 427994 19772119 ~ 19993954 (+)
G28770 NA other downstream 1366979 20711104 ~ 20761147 (+)
G28826 NA other downstream 2052088 21396213 ~ 21403450 (+)

Expression


Co-expression Network