G28558 (baz2b)



Basic Information


Item Value
gene id G28558
gene name baz2b
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19420548 ~ 19435713 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU37983
cctcATCATATGTCTCCACTTTTTTAACCTTCTTcatttcttcctcctcctcatcctcctcctcctctgcctggTCATCACTGTCGTCATCCTCATCATCGTCATCGTCTCCCGAGTCGTCAGATTCCTTGTTAGCCGGGAGACCAGCTGTGGGGTTACATGTCCCAGGGATCCCCACTCCAGGAATTCCAACTCCAGGTATACTAACTCCAGGAATCCCGATCCCGGGCTCTCCTCCACGAAACAAATCTACTAGAGACTGTACCAGATGGTTCTGAGAGAAacccttccaggcagctaaagGGTCTGCTTGTCCCAGCCCTGGTGTCTGTCCCAGCCCTGGTGTCTGTCCCTTACCCTTAGTGGTCTTGTTCTTTCTGGATCCATGGCCTGCGACATGGGGTGAGGTAGTGGAGGGCTGTGACGGAGGCCCAGAGTGGGCAGTAGTTTGGGTCCTGCTCGCCCCTGTGCTCAGATTGACAGGCATCGAGCCAGCATCGGAGTCACACTGAGGGGACTTGCCATGAGAGGCAGAGTCTTTGCGAGGTTTTGTGATGAGGGCCAAAGGTGCGTCCTGAGTGATGCTTTGGATGACTCCATTGGGGTGGTGAGGTTCAGGGAGCCCCAGCAGGGCACTCGAGAGGAAGAGGTTGGAGTGATTGTTCTGGGGTGGAGGAGGCGGAGCGGGTGGCAATGGCGATGAAGACAGAGACGTCCTCTTGGGAGACTTGTTTggcccctgctgctgcttcttTAGCTCAGCTGGGAAAGTCTGCCCTTGGGACATGAGGG
>TU37984
GTGGCTTGGTCGACTTCATCctcATCATATGTCTCCACTTTTTTAACCTTCTTcatttcttcctcctcctcatcctcctcctcctctgcctggTCATCACTGTCGTCatcgtcgtcatcatcatcgtcgCTGTCTCCGCCCAGTTTCCTCTTGCGTTTGGCGGCAGAGGACGGAGTGCCAATAGACTGGTTCTCTTCAACACCCATACTGGCCTCCCTCCTCCCAGTACGTTTGGCATGAATGGTCCTCAACCTGCATAAACACACAGGTTCAGCGTGACAGTGTAGGGAAA

Function


symbol description
baz2b Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be involved in chromatin remodeling. Predicted to act upstream of or within modulation of age-related behavioral decline. Predicted to be located in nucleus.

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU37983 True 792 lncRNA 0.56 3 19420548 19435215
TU37984 False 292 lncRNA 0.52 2 19434943 19435713

Neighbor


gene id symbol gene type direction distance location
marchf7 LOC104963329 coding downstream 62181 19343424 ~ 19358367 (-)
psmd14 psmd14,psde,LOC107563735 coding downstream 187708 19227639 ~ 19232840 (-)
fn1b fn1,LOC103359471 coding downstream 212905 19182528 ~ 19207643 (-)
LOC120555913 prss23,LOC103365183,LOC104967790 coding downstream 391311 19025898 ~ 19029237 (-)
grpr grpr,LOC103365195 coding downstream 470278 18942607 ~ 18950270 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding upstream 23458 19459171 ~ 19495413 (-)
gtf2f2a gtf2f2 coding upstream 64816 19500529 ~ 19508532 (-)
gpalpp1 gpalpp1 coding upstream 72972 19508685 ~ 19511713 (-)
LOC120556479 NA coding upstream 818000 20253713 ~ 20279186 (-)
tdrd3 tdrd3 coding upstream 1039914 20475627 ~ 20497725 (-)
G28557 NA non-coding downstream 2113 19417412 ~ 19418435 (-)
G28552 NA non-coding downstream 11046 19351997 ~ 19409502 (-)
G28545 NA non-coding downstream 89033 19330490 ~ 19331515 (-)
G28516 NA non-coding downstream 126238 19292974 ~ 19294310 (-)
G28495 NA non-coding downstream 193054 19226132 ~ 19227494 (-)
G28623 LOC103359454,LOC100700192 non-coding upstream 93859 19529572 ~ 19531634 (-)
G28632 LOC102784954 non-coding upstream 114414 19550127 ~ 19551890 (-)
G28637 NA non-coding upstream 121965 19557678 ~ 19559314 (-)
LOC120556360 NA non-coding upstream 138606 19574319 ~ 19600624 (-)
G28670 NA non-coding upstream 488022 19923735 ~ 19923998 (-)
LOC120555836 pcnp other downstream 294137 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 350552 19054091 ~ 19069996 (-)
G28345 NA other downstream 700529 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 761889 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 1000049 18416069 ~ 18420499 (-)
LOC120555658 NA other upstream 2144255 21579968 ~ 21583558 (-)
G28933 NA other upstream 2145329 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 2450875 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 2835157 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 3112987 22548700 ~ 22601557 (-)

Expression



Co-expression Network