G28637


Basic Information

Item Value
gene id G28637
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 19557678 ~ 19559314 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38083
CGGCAAGCACTGCATGCCCACCCCCATCAACAGCTATGCTAGCAGTAACAGTCCTCTGATCTCCCACCCACAGCTTCCATCAAAAAGGTTATATTGGTTAATTGTGGATATCAAATCTCCTTTTCTCAGTAATGTAGTTATAGGCTAACTTACAGCAAAGTGTGGCAGAAGGTCTACATGGTCTGCCTCGGTGAAACCAGAAATCTCCATCGCCCGTGGTCGATAGTCCACGAATGCATGCAGTGACACACCTCTTCCCCGTCCTCTGGAGCCCCTTCCCCGGGCCCTGAGAGCACCGCGTCCCCGAGCGTGGCCCCCACGGCCTCGTCCTGGTGACAGGAGTCCCCTTTTAGCCGCCTCAATTTGCAGCTGGGTGTACTTGATCTTCAACAAAGCGGTGTCCTCTCCCGTCTGGGTCTTCTTGTACAGATCCATCTCAGCATCCAGCAGCTCCTTCTGTGCCTGGGCCTTGCTCTTGGCTGTGCGTAGTGGGTTATTGCTGCCTGAGATTCCCTTTATCTCCTCTTGTAGTTTGGTGATGCTCTTGGTTAACATGCCCAACGTTTCCATGATCTTGGCTTTATCCTCTGCCTTCATTGCTTTGTTCTTCTCAAGTTTGGATATCAGGAGCTTCTGTGTCTCAATGTGCTTCTCCAATATTTCCTGCTTCTTCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38083 True 677 lncRNA 0.51 4 19557678 19559314

Neighbor

gene id symbol gene type direction distance location
gpalpp1 gpalpp1 coding downstream 45965 19508685 ~ 19511713 (-)
gtf2f2a gtf2f2 coding downstream 49146 19500529 ~ 19508532 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding downstream 62265 19459171 ~ 19495413 (-)
marchf7 LOC104963329 coding downstream 199311 19343424 ~ 19358367 (-)
psmd14 psmd14,psde,LOC107563735 coding downstream 324838 19227639 ~ 19232840 (-)
LOC120556479 NA coding upstream 694399 20253713 ~ 20279186 (-)
tdrd3 tdrd3 coding upstream 916313 20475627 ~ 20497725 (-)
pcdh17 LOC104926281,LOC104949434 coding upstream 1361630 20920944 ~ 20990225 (-)
LOC120556394 LOC104958904,LOC103352838,LOC105933796,LOC103378628,LOC107088303,LOC107687747 coding upstream 1793217 21352531 ~ 21362696 (-)
txnl4b txnl4b coding upstream 1809598 21368912 ~ 21371958 (-)
G28632 LOC102784954 non-coding downstream 5788 19550127 ~ 19551890 (-)
G28623 LOC103359454,LOC100700192 non-coding downstream 26044 19529572 ~ 19531634 (-)
G28558 baz2b non-coding downstream 121965 19420548 ~ 19435713 (-)
G28557 NA non-coding downstream 139243 19417412 ~ 19418435 (-)
G28552 NA non-coding downstream 148176 19351997 ~ 19409502 (-)
LOC120556360 NA non-coding upstream 15005 19574319 ~ 19600624 (-)
G28670 NA non-coding upstream 364421 19923735 ~ 19923998 (-)
G28674 pcdh9 non-coding upstream 432618 19991932 ~ 19993954 (-)
G28677 NA non-coding upstream 503219 20062533 ~ 20063645 (-)
G28678 NA non-coding upstream 505056 20064370 ~ 20064710 (-)
LOC120555836 pcnp other downstream 431267 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 487682 19054091 ~ 19069996 (-)
G28345 NA other downstream 837659 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 899019 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 1137179 18416069 ~ 18420499 (-)
LOC120555658 NA other upstream 2020654 21579968 ~ 21583558 (-)
G28933 NA other upstream 2021728 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 2327274 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 2711556 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 2989386 22548700 ~ 22601557 (-)

Expression


Co-expression Network