G28696


Basic Information

Item Value
gene id G28696
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 20113987 ~ 20114360 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38142
ggctctgcaggcagaactagaacaaggtcatgtagctgctgtttggcacttttactaaggtaaccatgctttcattatgaggccagaggcctgtactacgaagcaagatttggcgttaatgaggtaacttcaggttcaccagggttttctgtatcacgaaggtggatcacttgataccgggttcaatcgccgtggtaacttatgctggacgcctaacctggtcgggagcaggttaagttggagatcagagatcaaccggtgtaaaagcaccgcctactgaccaatcaatactcgattgataacggcgatcaccgttcttagaagatcaggcggagctcggtgcgcagagagagagagagagagagagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38142 True 374 lncRNA 0.49 1 20113987 20114360

Neighbor

gene id symbol gene type direction distance location
pou4f1 pou4f1,LOC103143517,LOC106914826 coding upstream 496535 19614845 ~ 19617452 (+)
obi1 NA coding upstream 500262 19606123 ~ 19613725 (+)
rbm26 rbm26 coding upstream 552262 19549354 ~ 19561725 (+)
LOC120556547 LOC103359454,LOC102294290,LOC100700192 coding upstream 568331 19535697 ~ 19545656 (+)
LOC120556555 LOC103359454,LOC102294290 coding upstream 580174 19528085 ~ 19533813 (+)
LOC120555422 pcdh20 coding downstream 328039 20442399 ~ 20446773 (+)
LOC120555780 diaph3 coding downstream 389738 20504098 ~ 20692974 (+)
LOC120556481 NA coding downstream 1172483 21286843 ~ 21287974 (+)
nkpd1 LOC104962748 coding downstream 1216793 21331153 ~ 21352064 (+)
trmt10c NA coding downstream 1257797 21372157 ~ 21374142 (+)
LOC120555794 NA non-coding upstream 141747 19971219 ~ 19972240 (+)
G28590 NA non-coding upstream 602245 19511014 ~ 19511742 (+)
LOC120555526 NA non-coding upstream 613764 19496214 ~ 19500223 (+)
LOC120556586 NA non-coding upstream 615763 19498093 ~ 19498224 (+)
LOC120556587 NA non-coding upstream 616114 19497738 ~ 19497873 (+)
G28721 LOC103376870 non-coding downstream 241712 20356072 ~ 20356354 (+)
G28745 NA non-coding downstream 464782 20579142 ~ 20580115 (+)
G28776 NA non-coding downstream 663183 20777543 ~ 20777816 (+)
G28777 NA non-coding downstream 683052 20797412 ~ 20797671 (+)
G28778 NA non-coding downstream 711864 20826224 ~ 20826477 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 120033 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 593769 19512356 ~ 19520218 (+)
G28581 NA other upstream 626454 19487246 ~ 19487533 (+)
LOC120555697 NA other upstream 1026923 19074308 ~ 19087064 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other upstream 1538045 18561873 ~ 18575942 (+)
G28770 NA other downstream 596744 20711104 ~ 20761147 (+)
G28826 NA other downstream 1281853 21396213 ~ 21403450 (+)
grk1a grk1 other downstream 1306750 21421110 ~ 21433147 (+)
tpp2 tpp2 other downstream 1411232 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 1481971 21596331 ~ 21603906 (+)

Expression


Co-expression Network