G28745



Basic Information


Item Value
gene id G28745
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 20579142 ~ 20580115 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU38206
GGTGAAGCCAGGTGTGTATAGTTACTGGACGTTCTGGATGTCTCTTGAGCTTTCTGTCAGGCTGACTGAAGTTCAAGACTTAGGTGGATCAGAACCATACAATGAGTCAACAGTCAAGCCGCGCGGCTGGTTTGACTGTTCGTCTCCCCTCTGTTGACTATAGAGCTGACAGATGTGTCGGAATGGTGGATTTGTTCACTTGCTGCAGACAGCCCTCCTCCTGTGCATCAGATGTCTCATAGTGGATTTTGctcgaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcatgtGGTGTTTGCACATTGAATTGCGAGCCCTCCCAATTTTCCCTGCTACAGAAACTCCCCTAATAACAGTGATTTAAACTTTACCTGCATGACTGCCTTGATTAGCTATTGGAAACAACACAGTGATTTAATTACCCTTTTAAGACCGCTGCCCTCTCAACTTTCCCTTtgctgtgtgcttgtgtatcTGCTCTCTCACGGGGAGGCGATCGTATCACTACAACATGCCATAAATAATGACACCCCGTCAAGAGAAAAGTCAGTAGAGGGTGTTATATCTCCTTAGGAAGTAAGCTAGTTGGACACATATTGGATTATATGACGGGCcaaataatcacacacacactgtctgtctCTTGCTTCTCTCACTCACACCACTGTCAGTTCTTTACTTCACTTGATGACTTCTAAGATTTTAGTATTAGTTATTGAgtacagtattttttcttttccatttgACATTAGTGTTAAGATTTTGTGCGTGTGCAAAAAGGAGGGCAGTTCCGCGTTTTTCGCCGATTAGAAATTCATCCTGATAAGATGAATTGCTGGTGTGAGCGTAGAGGgctggggagaaagagaggagattTTGGTTTGTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU38206 True 910 lncRNA 0.45 2 20579142 20580115

Neighbor


gene id symbol gene type direction distance location
LOC120555422 pcdh20 coding upstream 132369 20442399 ~ 20446773 (+)
pou4f1 pou4f1,LOC103143517,LOC106914826 coding upstream 961690 19614845 ~ 19617452 (+)
obi1 NA coding upstream 965417 19606123 ~ 19613725 (+)
rbm26 rbm26 coding upstream 1017417 19549354 ~ 19561725 (+)
LOC120556547 LOC103359454,LOC102294290,LOC100700192 coding upstream 1033486 19535697 ~ 19545656 (+)
LOC120556481 NA coding downstream 706728 21286843 ~ 21287974 (+)
nkpd1 LOC104962748 coding downstream 751038 21331153 ~ 21352064 (+)
trmt10c NA coding downstream 792042 21372157 ~ 21374142 (+)
ercc5 ercc5,LOC104958986 coding downstream 801094 21381209 ~ 21390547 (+)
LOC120556135 tmem255b coding downstream 854144 21434259 ~ 21453303 (+)
G28721 LOC103376870 non-coding upstream 222788 20356072 ~ 20356354 (+)
G28696 NA non-coding upstream 464782 20113987 ~ 20114360 (+)
LOC120555794 NA non-coding upstream 606902 19971219 ~ 19972240 (+)
G28590 NA non-coding upstream 1067400 19511014 ~ 19511742 (+)
LOC120556586 NA non-coding upstream 1080918 19498093 ~ 19498224 (+)
G28776 NA non-coding downstream 197428 20777543 ~ 20777816 (+)
G28777 NA non-coding downstream 217297 20797412 ~ 20797671 (+)
G28778 NA non-coding downstream 246109 20826224 ~ 20826477 (+)
G28792 NA non-coding downstream 493426 21073541 ~ 21073755 (+)
LOC120555568 NA non-coding downstream 562610 21142725 ~ 21143190 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 585188 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 1058924 19512356 ~ 19520218 (+)
G28581 NA other upstream 1091609 19487246 ~ 19487533 (+)
LOC120555697 NA other upstream 1492078 19074308 ~ 19087064 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other upstream 2003200 18561873 ~ 18575942 (+)
G28770 NA other downstream 130989 20711104 ~ 20761147 (+)
G28826 NA other downstream 816098 21396213 ~ 21403450 (+)
grk1a grk1 other downstream 840995 21421110 ~ 21433147 (+)
tpp2 tpp2 other downstream 945477 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 1016216 21596331 ~ 21603906 (+)

Expression



Co-expression Network